Query= MSMg01no510_h04.b1 MSMg01no510_h04.b1 CHROMAT_FILE:
MSMg01no510_h04.b1 PHD_FILE: MSMg01no510_h04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:02 2005
(692 letters)
>mm_chr10_16710697_16711788
Length = 1092
Score = 1222 bits (632), Expect = 0.0
Identities = 674/688 (97%), Gaps = 2/688 (0%)
Strand = Plus / Minus
Query: 5 gaattcctgagt-tttctaacactgccactctgtgcttttcagtaagcaaattaaaggtt 63
|||||||||||| | | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 891 gaattcctgagtctatataacactgccactctgtgcttttcagtaagcaaattaaaagtt 832
Query: 64 cagattatagtgccctctttggcaaaaccaaggagtgagacctggtaactcttaggatac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 cagattatagtgccctctttggcaaaaccaaggagtgagacctggtaactcttaggatac 772
Query: 124 tcccggttccagggtttcatgttctatgatcttatcttaggaacttagctacatgtttgc 183
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 771 tccaggttccagggtttcatgttctatgatattatcttaggaacttagctacatgtttgc 712
Query: 184 atagaaacatttcataaaatgagttcatatcattggctttgttaatacctgcatggctag 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 711 atagaaacatttcataaaatgagttcatatcattggctttgttaatacctgcatagctag 652
Query: 244 agaagagttaaagacagagggtagatgggaggtagagaagagagtcccatagtccaaaca 303
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 651 agaagagttaaagacagagggtagatgggaggcagagaagagagtcccatagtccaaaca 592
Query: 304 tgctttttagacaaatttaagatgtactttctgtgtagaatttgagcaaaagtaaaatca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tgctttttagacaaatttaagatgtactttctgtgtagaatttgagcaaaagtaaaatca 532
Query: 364 ctgtaaattttagtgtctattttatggatggttattagggattttagttatttaatttcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ctgtaaattttagtgtctattttatggatggttattagggattttagttatttaatttcc 472
Query: 424 acaaaaattctaaaataactattagtagccaactgaaacagaatgctagactctggctgg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 acaaaaattctaaaataactattagtagccaactgaaacagaatgctagactctggctgg 412
Query: 484 aaaaatccccagatataaagttaagaaatggcagacgtgctggttttttgtgtgtgcttg 543
|||| |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 411 aaaa-tccccagataaaaagttaagaagtggcagaagtgctggttttttgtgtgtgcttg 353
Query: 544 agggatctagcagttgccttgagcaaatgacaacactggggaacaaagaggttctcaaca 603
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 352 agagatctagcagttgccttgagcaaatcacaacactggggaacaaagaggttctcaaca 293
Query: 604 tagggttaagtagcaacaaggtgctaattcctgctgattctgtacttttctgtcatctaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tagggttaagtagcaacaaggtgctaattcctgctgattctgtacttttctgtcatctaa 233
Query: 664 taataccaatcatgacaatagaatactg 691
||||||||||||||||||||||||||||
Sbjct: 232 taataccaatcatgacaatagaatactg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space: 737924
Effective search space used: 737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_h04.g1 MSMg01no510_h04.g1 CHROMAT_FILE:
MSMg01no510_h04.g1 PHD_FILE: MSMg01no510_h04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:02 2005
(245 letters)
>mm_chr10_16563616_16564260
Length = 645
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Plus
Query: 1 ttcacatggtgtgcagataaagatctagagaatctgttgaggtttccctagatttgtctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcacatggtgtgcagataaagatctagagaatctgttgaggtttccctagatttgtctt 260
Query: 61 tccttgacttcttaaattccctactttgtttctactctgtgtctcctttgtcggtttttc 120
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccttgacttcttaaattctctactttgtttctactctgtgtctcctttgtcggtttttt 320
Query: 121 atgtctaaaacaaaacatgttaaatttccataaaaatatggccactaaagatacataagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtctaaaacaaaacatgttaaatttccataaaaatatggccactaaagatacataagc 380
Query: 181 caattctagcattctttcacagtcattattcttttaaattatgtgtaatgaagttggatc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 caattctagcattctttcacagtcattattcttttaaattatgtgtaatgaaattggatc 440
Query: 241 tca 243
|||
Sbjct: 441 tca 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
