CCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCATAAACTGGGCGGA
ATCTGCTATCATTCCACAAACAGAGAGAAGGGGTCAATGAGTCAACATAC
AGTGACATTTGTTTTCTCTACGTAAAGAGATGGAGAATATTAACAAAACT
CTGCTCACTTGGGAATCTTCATCGTTTCACCTAGTAAGCTACCAAACTAT
CTATAGGAATTCTGGAAAGGAAACGTACAGCATCTCATTAAAGCACTAAT
TGTTCTGCCTATTTCCTCAGTAGACTTAAGGTGAGAATACCTATCTAGAG
ATGATTTATTGAGAAATTTATAATTTGACACAACTGGAATCTTGTATCTC
AACCCAGCCTAGTTATTCTGCTTATTTAAACAGGAAGATTTTTTGTTGTT
CTGTTTTTTCCCCTTCCCTTTGTCTTACTATTTTTTTTCTATTTTAACAC
TATTAAAATCAAGAAGAAAAAATAAAAGCAATGGCTAATACATTTTTAAA
GTATATGAGGCTCTTTATGTAGAATGTAGAGAATTATTACTCTATCTGTG
CATGTATGTTTTTATAGGTAGTTATCCTCAAATCATACTACCTTAGTCCT
TTTACTTCATCTTCTCCAGGCACGACAAGGAAACATGCTTACATTTGAAG
GGATAGAAATTTCCTTTGAATAACTAGGTGGCTAAGCTTGTGTCACCCTT
CCAGCTGAGTAGTTGGGCCTTGCAAAATCTAAGTATTTAAGCTGATGGN

CATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTCCCGAAAAACTGACCCGAGGAATACTGAGTGGCAGAGAAG
CACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAATGCAAATCAAA
ACAACTTTGAGATCCCACCTCACACCAGTCAGAATGGCTAAGTTAAAAAT
TTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCC
TCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTC
TTGCAGTTCCTCAGATTTTTTGATATAGTACTACCGGAGGATCCCGCAAT
ATCTCTCCTGGGCATATACCCAACCGGTAAGAAGAACACATGCGCCACTA
TGTTCATAGCAGCCTTATTTATTATAGCCAGAAGCTGGAAAGAACCCAGA
TGCCCCTCAACAGAGGAATGGATACTGAAAATGTGGTACATTTACACAAT
GGAGTACTACTCATCTATTAAAATGAATGAATTTATGAAATTCCTAGGCA
AATGGATGGACCTGAAGGGCATCATCCTGAGTGAGGTAACCCAATCACAA
AGGAACTCACACAACATGTACTCACGGATAAGTGGATATTAGCCCAGAAT
CTTAGGTTACCCAAGATATAAGATACAATTTGCTAAATGCATGAAACTCA
AGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGG
A

Query= MSMg01no510_o20.b1 MSMg01no510_o20.b1 CHROMAT_FILE:
MSMg01no510_o20.b1 PHD_FILE: MSMg01no510_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:38 2005
         (670 letters)



>mm_chr10_49220537_49221608
          Length = 1072

 Score = 1181 bits (611), Expect = 0.0
 Identities = 656/671 (97%), Gaps = 2/671 (0%)
 Strand = Plus / Minus

                                                                       
Query: 2   aaggggtcaatgagtcaacatacagtgacatttgttttctctacgtaaagagatggagaa 61
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 aagggttcaatgagtcaacatacagtgacatttgttttctctacgtaaagagatggagaa 813

                                                                       
Query: 62  tattaacaaaactctgctcacttgggaatcttcatcgtttcacctagtaagctaccaaac 121
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||
Sbjct: 812 tattaacaaaactctgctcacttgggaatcttcatcacttcacctagtaagctacgaaac 753

                                                                       
Query: 122 tatctataggaattctggaaaggaaacgtacagcatctcattaaagcactaattgttctg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tatctataggaattctggaaaggaaacgtacagcatctcattaaagcactaattgttctg 693

                                                                       
Query: 182 cctatttcctcagtagacttaaggtgagaatacctatctagagatgatttattgagaaat 241
           ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 692 cctatttcctcagcagacttaaggtgagagtacctatctagagatgatttattgagaaat 633

                                                                       
Query: 242 t-tataatttgacacaactggaatcttgtatctcaacccagcctagttattctgcttatt 300
           |  | || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tgaaaaacttgacacaactggaatcttgtatctcaacccagcctagttattctgcttatt 573

                                                                       
Query: 301 taaacaggaagattttttgttgttctgttttttccccttccctttgtcttacta-ttttt 359
           |||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 572 taaacaggaagattttttcttgttctgttttttcccctttcctttgtcttactatttttt 513

                                                                       
Query: 360 tttctattttaacactattaaaatcaagaagaaaaaataaaagcaatggctaatacattt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tttctattttaacactattaaaatcaagaagaaaaaataaaagcaatggctaatacattt 453

                                                                       
Query: 420 ttaaagtatatgaggctctttatgtagaatgtagagaattattactctatctgtgcatgt 479
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 taaaagtatatgaggctctttatgtagaatgtagagaattattactctatctgtgcatgt 393

                                                                       
Query: 480 atgtttttataggtagttatcctcaaatcatactaccttagtccttttacttcatcttct 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 atgtttttataggtagttatcctcaaatcatactaccttagtccttttacttcatcttct 333

                                                                       
Query: 540 ccaggcacgacaaggaaacatgcttacatttgaagggatagaaatttcctttgaataact 599
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ccaggcactacaaggaaacatgcttacatttgaagggatagaaatttcctttgaataact 273

                                                                       
Query: 600 aggtggctaagcttgtgtcacccttccagctgagtagttgggccttgcaaaatctaagta 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aggtggctaagcttgtgtcacccttccagctgagtagttgggccttgcaaaatctaagta 213

                      
Query: 660 tttaagctgat 670
           |||||||||||
Sbjct: 212 tttaagctgat 202


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1072
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1062
Effective search space:   700920
Effective search space used:   700920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)