Query= MSMg01no511_c11.b1 MSMg01no511_c11.b1 CHROMAT_FILE:
MSMg01no511_c11.b1 PHD_FILE: MSMg01no511_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:56 2005
(573 letters)
>mm_chr10_62709079_62710051
Length = 973
Score = 1062 bits (549), Expect = 0.0
Identities = 565/571 (98%), Gaps = 3/571 (0%)
Strand = Plus / Plus
Query: 5 gaattcctaatttgttctctgtgatgattctgtactcatggggggatggtaaaagctttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctaatttgttctctgtgatgattctgtactcatggggggatggtaaaagctttt 264
Query: 65 tattttcatttacttgtgtaaattataattcttccattttattccccattttactttagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tattttcatttacttgtgtaaattataattcttccattttattccccattttactttagg 324
Query: 125 tatgtaatgttttgttgcttagttagaagtactgtttaatcccctagttgctgcttccac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatgtaatgttttgttgcttagttagaagtactgtttaatcccctagttgctgcttccac 384
Query: 185 gttttcagtgctagcttttaaagggttgtgaatgccaggtctgactatggagagagatct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttttcagtgctagcttttaaagggttgtgaatgccaggtctgactatggagagagatct 444
Query: 245 aagcacaaggtaaattaatttatcaggtaataagcattggaaacatttggtcagatttca 304
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagcacaatgtaaaataatttatcaggtaataagcattggaaacatttggtcagatttca 504
Query: 305 tggtgtttttctggatgttgtatttaaaattgggtagtaacacatttgaggtggaattat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggtgtttttctggatgttgtatttaaaattgggtagtaacacatttgaggtggaattat 564
Query: 365 tagatattttgctctcagttgtgataacccaaagctcctacaggaaggcagtaaattcag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagatattttgctctcagttgtgataacccaaagctcctacaggaaggcagtaaattcag 624
Query: 425 aggagaaagctgccgtgctgtttgtcacagtaacacacttaggcgttccctgtggtaatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aggagaaagctgccgtgctgtttgtcacagtaacacacttaggcgttccctgtggtaatc 684
Query: 485 cttgttctctgtcatcccattgtaggaggtgtttagttggtttggttggttttctttttg 544
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 685 cttgttctctgtcatcccattgtaggaggtgtttagttggtt-ggttggttttctttttg 743
Query: 545 tttttttttgggtttttttttt--gtttgtt 573
||||||||||||||||||||| |||||||
Sbjct: 744 gttttttttgggttttttttttttgtttgtt 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_c11.g1 MSMg01no511_c11.g1 CHROMAT_FILE:
MSMg01no511_c11.g1 PHD_FILE: MSMg01no511_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:56 2005
(565 letters)
>mm_chr10_62731764_62732728
Length = 965
Score = 936 bits (484), Expect = 0.0
Identities = 496/500 (99%), Gaps = 2/500 (0%)
Strand = Plus / Minus
Query: 67 ataaacaaaggaaaaaagcctagtaagagaaacagagtacatgcagaagtatcatgttca 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 ataaacaaaggaaaaaagcctagtaagagaaacagagtacatgcagaagtatcatgttca 906
Query: 127 tgtgttggaaaacttaacactgtaaagattaccctaatactgatttatagacaccataag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tgtgttggaaaacttaacactgtaaagattaccctaatactgatttatagacaccataag 846
Query: 187 ctcaacaaatatttcagcag-ttctgtaaacatagaaactaacagctgatttaaaataca 245
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 845 ctcaacaaatatttcagcagctt-tgtaaacatagaaactaacagctgatttaaaataca 787
Query: 246 tggaaatgaaatcaggacaaatcttgtaaaagaaaacccagcggccttttgttcagagta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tggaaatgaaatcaggacaaatcttgtaaaagaaaacccagcggccttttgttcagagta 727
Query: 306 ccaagaagtaattagttagaaagggacaagtgcttacctttagaaagtgcaagcgaatga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ccaagaagtaattagttagaaagggacaagtgcttacctttagaaagtgcaagcgaatga 667
Query: 366 tagtaaccacacgcaacctgtactatctggatatccgaaagacttttaatatttctagaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tagtaaccacacgcaacctgtactatctggatatccgaaagacttttaatatttctagaa 607
Query: 426 aagaaaagagagcagacttaattccctctgtggaacaagtggatcttacgtgctactcat 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aagaaaagagagcagacttaattccctctgtggaacaagtggatcttacgtgctactcat 547
Query: 486 gtgcaactcactggctagttgtctgctgacttttcagggcatgctgtctctttcaatcac 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 546 gtgcaactcactggctagttgtctgctgacttttcagggcatgctgtctctttcagtcac 487
Query: 546 ggctaattatcaaaacttca 565
||| ||||||||||||||||
Sbjct: 486 ggccaattatcaaaacttca 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
