Query= MSMg01no511_g11.b1 MSMg01no511_g11.b1 CHROMAT_FILE:
MSMg01no511_g11.b1 PHD_FILE: MSMg01no511_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:16 2005
(678 letters)
>mm_chr10_104383081_104384158
Length = 1078
Score = 1222 bits (632), Expect = 0.0
Identities = 653/660 (98%)
Strand = Plus / Plus
Query: 19 aatataataaagatgccattttgtctgtattttccagaaactgagctaccttccaatgtc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aatataataaagatgccattttgtctgtattttccagaaactgagctaccttccaatgtc 278
Query: 79 cctcagaaaaagttgaagacatgggcactacgccagactgtgtatgctggaatattggtt 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cctcagaaaaagttgaagacatgggcactacgccagactgtgtatgctggaatattggtt 338
Query: 139 ctgcccttatgaagaccacatggcttaatatttataaatatgcttacaatagtacatagc 198
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 339 ctgcccttatgaggaccacatggcttaatatttataaatatgcttacgatagtacatagc 398
Query: 199 aaataagaatgataataattgctacatgaaggtgtaataagtaaagaatgtaacagagca 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aaataagaatgataataattgctacatgaaggtgtaataagtaaagaatgtaacagagca 458
Query: 259 tataaaaatatgaagccaggcagtctgactccacatgtatgctttaatcattacagctgt 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tataaaaatatgaagccaggcagtctgactccacatgtatgctttaatcattacagctgt 518
Query: 319 gttgtaatatgagaaaatagcagctgctactgtgaacagagaactgcctggcttatacaa 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 519 gttgtaatatgagaaaatagcagctgctactgtgaacagagaactgcctggcttatagaa 578
Query: 379 ctgggttttatacaaggggctactttgagcaactccaggggttgagggtgatattctgca 438
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ctgtgttttatacaaggggctactttgagcaactccaggggttgagggtgatattctgca 638
Query: 439 tggaaagtgtcccgcaggacatagcagcataacggtggtccctagatctatgcaatgtgc 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tggaaagtgtcccgcaggacatagcagcataacggtggtccctagatctatgcaatgtgc 698
Query: 499 cgatctgggtcagcaataatgtaataaggtttctgtactgttcgcagtctggttgtgtcc 558
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 699 cgatctgggtcagcaataaggtaataatgtttctgtactgttcgcagtctggttgtgtcc 758
Query: 559 tcagatttccatgaatgttgttcttgatggaggatccagtgaacccagatgagtgtaaat 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tcagatttccatgaatgttgttcttgatggaggatccagtgaacccagatgagtgtaaat 818
Query: 619 agctccccatgacaagtcactgctatgttgggacgtacaaatatttaggtaaactgagaa 678
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 ggctccccatgacaagtcactgctatgttgggacgtacaaatatttaggtaaactgagaa 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_g11.g1 MSMg01no511_g11.g1 CHROMAT_FILE:
MSMg01no511_g11.g1 PHD_FILE: MSMg01no511_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:16 2005
(493 letters)
>mm_chr10_104520499_104521392
Length = 894
Score = 683 bits (353), Expect = 0.0
Identities = 369/375 (98%), Gaps = 3/375 (0%)
Strand = Plus / Minus
Query: 1 actgtaaggatagatttagaacgctctccttatgagtctgctgataatactaagggactc 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 375 actgtaaggatagatttagaacgctctctttatgagtctgctgataatactaagggactc 316
Query: 61 aaggagaagatc-gtctctttgaacataaaaacattacctcaaatgtatttctaaatttt 119
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 315 aaggagaagatctgtctctttgaacataaaaacattacctcaaatgtatttttaaatttt 256
Query: 120 ttatatttctagaaactgggtgaatgttgattatagatttcaccaatgtttgggatgtga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttatatttctagaaactgggtgaatgttgattatagatttcaccaatgtttgggatgtga 196
Query: 180 agacaccattaccaaagcaactctgag--aaaaaaaaccatttatttaggggcttgtgtt 237
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 195 agacaccattaccaaagcaactctgagaaaaaaaaaaccatttatttaggggcttgtgtt 136
Query: 238 caacttcagacagtcggttcttcatcaatgtggttgaaagcttggtgacagtatggcggg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 caacttcagacagtcggttcttcatcaatgtggttgaaagcttggtgacagtatggcggg 76
Query: 298 tgtgcaggcaggagagcactgtactggggcagtatagctggaatggtggggctgcctcta 357
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 75 tgtgcaggcaggagagcactgtactggggcagtgtagctggaatggtggggctgcctcta 16
Query: 358 ttttaacactggggg 372
|||||||||||||||
Sbjct: 15 ttttaacactggggg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 894
Length adjustment: 10
Effective length of query: 483
Effective length of database: 884
Effective search space: 426972
Effective search space used: 426972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
