Query= MSMg01no511_l16.b1 MSMg01no511_l16.b1 CHROMAT_FILE:
MSMg01no511_l16.b1 PHD_FILE: MSMg01no511_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:40 2005
(591 letters)
>mm_chr10_101827471_101828461
Length = 991
Score = 812 bits (420), Expect = 0.0
Identities = 429/432 (99%)
Strand = Plus / Minus
Query: 160 tttttatctatggatgttttgtctgaaagggtgtttgtgcacacgtgcaggtctggtgtc 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 tttttatctatggatgttttgtctgaaagggtgtttgtgcacacgtgcaggtctggtgtc 932
Query: 220 ctgggagtctaggagaaggcacttgttcacatggaactagaatcatggataactatgcac 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 ctgggagtctaggagaaggcacttgttcacatggaactagaatcatggataactatgcac 872
Query: 280 caccatgtgggttctgaaaactgaatccaagtcctctgcagagtaagtgctcttaatcac 339
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 caccacgtgggttctgaaaactgaatccaagtcctctgcagagtaagtgctcttaatcac 812
Query: 340 tgagttggatctccagaccccaggagttctcacagttactcagtcatcagaaaactagct 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tgagttggatctccagaccccaggagttctcacagttactcagtcatcagaaaactagct 752
Query: 400 ccacaaagccaacctagatcacgtctgaatgtggtactcccaatcttaatatctcctatt 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ccacaaagccaacctagatcacgtctgaatgtggtactcccaatcttaatatctcctatt 692
Query: 460 tgacctcacccctcagtttctgcaacttcctcaacactatagcagagattactatgcttc 519
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 691 tgaccttacccctcagtttctgcaacttcctcaacactatagcagagattactacgcttc 632
Query: 520 tagcatatgactcccacagtagcaaactgcacctgaataatagaaacatcatgctttata 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tagcatatgactcccacagtagcaaactgcacctgaataatagaaacatcatgctttata 572
Query: 580 taacacaggagt 591
||||||||||||
Sbjct: 571 taacacaggagt 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_l16.g1 MSMg01no511_l16.g1 CHROMAT_FILE:
MSMg01no511_l16.g1 PHD_FILE: MSMg01no511_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:40 2005
(523 letters)
>mm_chr10_101726056_101726978
Length = 923
Score = 915 bits (473), Expect = 0.0
Identities = 513/531 (96%), Gaps = 8/531 (1%)
Strand = Plus / Plus
Query: 1 agagaactagcaaagttcccaagcttctggtccgggctccagagggttgtcatggcccct 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 193 agagaactagcaaagttcccaagcttctggtaggggctccagagggttgtcatggcccct 252
Query: 61 ggctgggtgataaaatatgcatctgctttgttcctcctaaacagaaacacagtttaaacc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggctgggtgatataatatgcatctgctttgttcctcctaaacagaaacacagtttaaacc 312
Query: 121 tgaaacagaaacacagagatggacaaaagacaatcag--------actaacccatcagaa 172
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 313 tgaaacagaaacacagagatggacaaaagacaatcaggcacctggactaacccatcagaa 372
Query: 173 aaatattccattatttggtctgggcgtcttggacaagaacccccaaatgtaagggtccat 232
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 373 aaatattccattatttggtctgggcgtcctggacaagaatccccaaatgtaagggtccat 432
Query: 233 gattcccaaagaataatatcctggactcaagtagtatgtacaagcaaagagggttttatt 292
|||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||
Sbjct: 433 gattcccaaagaataatatcctggactcgagcagtatgtaaaagcaaagagggttttatt 492
Query: 293 ctgcagaagtccagcatgctggggtctcccattccaagatgggactcaccttgtatttaa 352
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctgcagaagtccagcatgctgggttctcccattccaagatgggactcaccttgtatttaa 552
Query: 353 actaagaaaaattacaagctggaggactaaagagcctatgactatgatgagaactataaa 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 actaagaaaaattacaagctggaggactaaagagcctatgactatgatgagaactataaa 612
Query: 413 tgttgccatttctggtagtctatacaaagtgttacctaatatgacacaacactttggaac 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tgttgccatttctggtagtctatacaaagtgttacctaatatgacacaacactttggaac 672
Query: 473 tgtatattgaaaaaatggaattaaatactaccaacttttcatatgtgtctt 523
|||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgtagattgaaaaaatggaattaaatactaccaacttttcatatgtgtctt 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
