Query= MSMg01no513_g02.b1 MSMg01no513_g02.b1 CHROMAT_FILE:
MSMg01no513_g02.b1 PHD_FILE: MSMg01no513_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:51 2005
(687 letters)
>mm_chr10_87548267_87549353
Length = 1087
Score = 1297 bits (671), Expect = 0.0
Identities = 680/683 (99%)
Strand = Plus / Plus
Query: 5 gaattccttaatattggaagcttaagatgtgaacccatttttaattttttaattttacaa 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttaagattggaagcttaagatgtgaacccatttttaattttttaattttacaa 264
Query: 65 gcatatgtttcccttaaagcacattagctggttccacaaattatgtcatatttaccttta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcatatgtttcccttaaagcacattagctggttccacaaattatgtcatatttaccttta 324
Query: 125 atccaaactattctttaatttttattattgttaatttccaaaatcaaatgacttttatca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atccaaactattctttaatttttattattgttaatttccaaaatcaaatgacttttatca 384
Query: 185 atttctaaatatttgcatattttttctgctattgatttctaacttaattccagtgtaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atttctaaatatttgcatattttttctgctattgatttctaacttaattccagtgtaaat 444
Query: 245 ccaaagcataatctatgatttaaaaaacaaagcttagcatacatagcaatcatgaaaaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccaaagcataatctatgatttaaaaaacaaagcttagcatacatagcaatcatgaaaaag 504
Query: 305 aaacaagctgtctagtcaacttcaatattattataaaaactagtttgtaaaagtatctct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaacaagctgtctagtcaacttcaatattattataaaaactagtttgtaaaagtatctct 564
Query: 365 tcctcgcctgttgtcttggaggcttactgctgaataagctcaccctccctagctctttct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcctcgcctgttgtcttggaggcttactgctgaataagctcaccctccctagctctttct 624
Query: 425 gaattctggttggctggctcaacgtagctgttctggctctaactcctttcccagctgact 484
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaattctggttggctggctcaacatagctgttctggctctaactcctttcccagctgact 684
Query: 485 aattcaaactggcttctcctagcctctgactaaattgctctgtttggcctcaaactaaca 544
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aattcaaactggcttctcccagcctctgactaaattgctctgtttggcctcaaactaaca 744
Query: 545 ctatcaattggttctactcttctggctccttctcattctctgggtcattcagtcttcacc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctatcaattggttctactcttctggctccttctcattctctgggtcattcagtcttcacc 804
Query: 605 tgtgtctaccttgttctctctgcaacctgtctataaaactgtcctagtgaaaattgcctc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tgtgtctaccttgttctctctgcaacctgtctataaaactgtcctagtgaaaattgcctc 864
Query: 665 tgaactccaagaactgaacagtc 687
|||||||||||||||||||||||
Sbjct: 865 tgaactccaagaactgaacagtc 887
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_g02.g1 MSMg01no513_g02.g1 CHROMAT_FILE:
MSMg01no513_g02.g1 PHD_FILE: MSMg01no513_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:51 2005
(568 letters)
>mm_chr10_87735805_87736772
Length = 968
Score = 1046 bits (541), Expect = 0.0
Identities = 563/573 (98%), Gaps = 5/573 (0%)
Strand = Plus / Minus
Query: 1 tctattgaaaagaagaatgaaaaccagcaaaatagtcaaatgtctctgttctcttttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 tctattgaaaagaagaatgaaaaccagcaaaatagtcaaatgtctctgttctcttttcca 843
Query: 61 tatgagcctctttgaggtctagcaatataaagaaagcagctttgagat-----aaaacaa 115
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 842 tatgagcctctttgaggtctagcaatataaagaaagcagctttgagataaaacaaaacaa 783
Query: 116 aacaaaacaaaacactgagaaacaatttagaaatattttgaagaagcaaccaccacaccc 175
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 782 aacaaaacaaaacactgagaaacaatttagaaatattttgaagaagcaagcaccacaccc 723
Query: 176 cagagcccccaggctcttagtggaagacagaaaacagagcaggaattctctgtcctatca 235
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 cagagtccccaggctcttagtggaagacagaaaacagagcaggaattctctgtcctatca 663
Query: 236 agacaacataaacactggcttcacattaagtcaacctcttgtccctggacactggctctc 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agacaacataaacactggcttcacattaagtcaacctcttgtccctggacactggctctc 603
Query: 296 aactcataaaaaagactgttaaatttccagggaaataaaaatcaaattttatccatataa 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aactcataaaaaagactgttaaatttccagggaaataaaaatcaaattttatccatataa 543
Query: 356 gcctgtatatacatgcactgtacttcattccaaatattttctcacccaggagtttggaat 415
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 542 gcctgtatatacatgcactgtactttattccaaatattttctcacccaggagtttggaat 483
Query: 416 aaaaatatctgtagttgatctgttataacagcccagatatcttgaatgacttccagtcac 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aaaaatatctgtagttgatctgttataacagcccagatatcttgaatgacttccagtcac 423
Query: 476 tttgcttgaaaactccagtgtctctgtgacattccaatgacagcttgatattgctgtcaa 535
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 422 tttgcttgaaaactccagtgtctctgtgacattccaatgacagcctgatattactgtcaa 363
Query: 536 tacgtttcattacttgtcaagacaacccttcct 568
|||||||||||||||||||||||||||||||||
Sbjct: 362 tacgtttcattacttgtcaagacaacccttcct 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
