Query= MSMg01no513_l14.b1 MSMg01no513_l14.b1 CHROMAT_FILE:
MSMg01no513_l14.b1 PHD_FILE: MSMg01no513_l14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:19 2005
(671 letters)
>mm_chr10_73848639_73849709
Length = 1071
Score = 1069 bits (553), Expect = 0.0
Identities = 568/573 (99%)
Strand = Plus / Minus
Query: 99 ggtactgagacagacagatccttaggactcactggcacccatcttaatctgaaatcttag 158
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1071 ggtactgagacagacagatccttaggactcactggcacccattttaatctgaaatcttag 1012
Query: 159 ttcccaatgagagactttgtctcagaaaacaaggtggatggctcctgagccaaggcctgt 218
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 ttcccaatgagagactttgcctcagaaaacaaggtggatggctcctgagccaaggcctgt 952
Query: 219 ggttgacctctgtcctgcactgtgtacttatgttcacgtacacagatacacacaaaactg 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 ggttgacctctgtcctgcactgtgtacttatgttcacgtacacagatacacacaaaactg 892
Query: 279 tacacacacacatacacacagaagaataaaatagaaaccaaaacaaaaaaatagtggata 338
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 tacatacacacatacacacagaagaataaaatagaaaccaaaacaaaaaaatagtggata 832
Query: 339 aactatcaggaatatcagaaacaccaaaagaccttgaaatccagatacggaagcggtgac 398
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 aactatcacgaatatcagaaacaccaaaagaccttgaaatccagatacggaagcggtgac 772
Query: 399 caaagtaattgaatgaacatagataaatgtgttttaattccagacgattgtggttgtgat 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 caaagtaattgaatgaacatagataaatgtgttttaattccagacgattgtggttgtgat 712
Query: 459 ttgtggtagaggctcaggccaggctataggttcaaattcctaagtttaaaagcaaagaaa 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ttgtggtagaggctcaggccaggctataggttcaaattcctaagtttaaaagcaaagaaa 652
Query: 519 ggaacaaagcaagcaaataaaaataattctggaatgattaaatcaatttatttattctta 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ggaacaaagcaagcaaataaaaataattctggaatgattaaatcaatttatttattctta 592
Query: 579 aaactgaggatcaggtctagagagagtgggaaatggacttcacttttctaaagccatggg 638
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 591 aaactgaggatcaggtctagagagagtgggaaatggacttcacgtttctaaagccatggg 532
Query: 639 cagcttaaggcggggatcatccaggttttgtta 671
|||||||||||||||||||||||||||||||||
Sbjct: 531 cagcttaaggcggggatcatccaggttttgtta 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_l14.g1 MSMg01no513_l14.g1 CHROMAT_FILE:
MSMg01no513_l14.g1 PHD_FILE: MSMg01no513_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:19 2005
(678 letters)
>mm_chr10_73692343_73693425
Length = 1083
Score = 1158 bits (599), Expect = 0.0
Identities = 663/689 (96%), Gaps = 16/689 (2%)
Strand = Plus / Plus
Query: 1 cttccccaacagggctgctctgttggacctcaataggagaggatgcacctaaccctggag 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cttccctaacagggctgctctgttggacctcaataggagaggatgcacctaaccctggag 259
Query: 61 atacttgttgcactagaatggaatacccaagggcccccaccctctcagaggagaagggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atacttgttgcactagaatggaatacccaagggcccccaccctctcagaggagaagggaa 319
Query: 121 gatggggaatggggagagggtcctgtgaggggagactggagggcatcaatcagaatacaa 180
|||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 320 gatggggagtggggagagggtcctgtgaggggagactggagggcagcaatcagaatgcaa 379
Query: 181 aatgaat-aatagataaataaatggaaagaaaaagaaactgggtattcaatacaagtaga 239
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 380 aatgaataaatagataaataaatggaaagaaaaagaaactgggaattcaatacaagtaga 439
Query: 240 taaaagttcaccttccattcccccaacataaaacttggcttacaagggttactattgatc 299
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 440 taaaagttcaccttccattcccccaacataaaacttggcttacaaaggttactattgatc 499
Query: 300 atttacttaaagaaagtgtgagaaaagaatgaataaaactaaattatacctgatatttac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atttacttaaagaaagtgtgagaaaagaatgaataaaactaaattatacctgatatttac 559
Query: 360 atcatctaactatttaatcaacct----cccccccc-ccgttaccctcatcaggaccgtg 414
|||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 560 atcatctaactatttaatcaacctcacccccccccctccgttaccctcatcaggaccgtg 619
Query: 415 cacaaaatctgaatgagaggcgaacaaccaccaccaccctcacagtagatgttctagatg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cacaaaatctgaatgagaggcgaacaaccaccaccaccctcacagtagatgttctagatg 679
Query: 475 gagatgacctgggacctatgtttctgccctgtgttcttgtgccaaacacacgtgactgtc 534
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 680 gagatgacctgggacctatgtttctgccttgtgttcttgtgccaaacacacgtgactgtc 739
Query: 535 gtccactcacctaccaagctgccattcctgaactgaggactccggtaagtacactttctt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 740 gtccactcacctaccaagctgccattcctgaactgaggactccggtaagtacaatttctt 799
Query: 595 cttctttctttcctgcttccttcctttctctttctccttc-cttccttccttc-ctttct 652
||||||||||||||||||||||||| ||||||||| || ||| || | ||| ||||||
Sbjct: 800 cttctttctttcctgcttccttcct--ctctttctc--tctctttct-ctttctctttct 854
Query: 653 ---tccttccttccttccttccttccttc 678
||||||||||||||||||||||||||
Sbjct: 855 ctttccttccttccttccttccttccttc 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1083
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1073
Effective search space: 716764
Effective search space used: 716764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
