Query= MSMg01no513_m22.b1 MSMg01no513_m22.b1 CHROMAT_FILE:
MSMg01no513_m22.b1 PHD_FILE: MSMg01no513_m22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:26 2005
(574 letters)
>mm_chr10_79209389_79210362
Length = 974
Score = 1073 bits (555), Expect = 0.0
Identities = 567/571 (99%)
Strand = Plus / Minus
Query: 4 ggaattcactgtcatctttggccacattagaagtttgaaaccaacctgggctacgtgtag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ggaattcactgtcatctttggccacattagaagtttgaaaccaacctgggctacgtgtag 664
Query: 64 gtaggtcccttagtccaacactgggaaggagaagacagcaaggtcaggctttccagatta 123
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 atagatcccttagtccaacactgggaaggagaagacagcaaggtcaggctttccagatta 604
Query: 124 gttctcatacatgtaaattggaagctaacatgagctacatgggactctgtgaatgtgaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gttctcatacatgtaaattggaagctaacatgagctacatgggactctgtgaatgtgaat 544
Query: 184 gaatgaatggatggatggatgaatgaaatcgcgatgtggtactatttacacgtcttttcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gaatgaatggatggatggatgaatgaaatcgcgatgtggtactatttacacgtcttttcc 484
Query: 244 atctttctacggccctgattccatttgcacaaacacatatacatacagagagacagagac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 atctttctacggccctgattccatttgcacaaacacatatacatacagagagacagagac 424
Query: 304 agagagaggcagagaggaggaggaggaagaggaggagaaacaaatagggtagggactggg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 agagagaggcagagaggaggaggaggaagaggaggagaaacaaatagggtagggactggg 364
Query: 364 cgtggtggcacacgactatagtcccagtactgggtggcagagcaggaggataaggaggat 423
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 363 cgtggtggcgcacgactatagtcccagtactgggtggcagagcaggagtataaggaggat 304
Query: 424 atctgttgagttcaagggaatcctgttaaattccaggacattcatggttaaatagtgaga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atctgttgagttcaagggaatcctgttaaattccaggacattcatggttaaatagtgaga 244
Query: 484 ctttgtgccaaaaatgtgcatatagtacataatatatacacatatgtaaatgttacgcac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ctttgtgccaaaaatgtgcatatagtacataatatatacacatatgtaaatgttacgcac 184
Query: 544 atatatatgaacaaataaaataaagcagaaa 574
|||||||||||||||||||||||||||||||
Sbjct: 183 atatatatgaacaaataaaataaagcagaaa 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_m22.g1 MSMg01no513_m22.g1 CHROMAT_FILE:
MSMg01no513_m22.g1 PHD_FILE: MSMg01no513_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:27 2005
(521 letters)
>mm_chr10_79036618_79037536
Length = 919
Score = 949 bits (491), Expect = 0.0
Identities = 515/525 (98%), Gaps = 6/525 (1%)
Strand = Plus / Plus
Query: 1 caggccagccaatgctacacagaccctgtctcaagaaaaaaaaaaaa---aaa-aaagaa 56
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 197 caggccagccaatgctacacagaccctgtctcaagaaaaaaaaaaaaaagaaagaaagaa 256
Query: 57 agaaagaaaaaaaattttaaaaagaagaaaactttttaaatgaaacatatcaaatggccc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agaaagaaaaaaaattttaaaaagaagaaaactttttaaatgaaacatatcaaatggccc 316
Query: 117 tccaaagcagtattaagaaagaaggggaagcaaactggacagctcatacagggagaggtg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tccaaagcagtattaagaaagaaggggaagcaaactggacagctcatacagggagaggtg 376
Query: 177 cagagatggagggcgagaggtgttccagtgcagaattgttttccagtacaaaccaaagga 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cagagatggagggcgagaggtgttccagtgcagaattgttttccagtacaaaccaaagga 436
Query: 237 aaaaacaaaatctatatacaagcatctatatacaaatgggtcacctaatgccctcccgca 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaaaacaaaatctatatacaagcatctatatacaaatgggtcacctaatgccctcccgca 496
Query: 297 gcagagtcacggtagtctatgctgacaagagccagggcaaggtcaagtacaaggatgcgt 356
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 497 gcagagtcacagtagtctatgctgacaagagccagggcaaggtcaagtacaagggtgcgt 556
Query: 357 ggggctcttgggattctggggctgagtcagaatattgaaatgttgaggtgactttgaaca 416
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 557 ggggctcttgggattctggggctgagtcagaacattgaaatgttgaggtgactttgaaca 616
Query: 417 gcagtgcacacagcgtttgaggccacaactgtttccaacatcctgtcttgttttgttacc 476
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 617 gcagtgcacacagcgtttgaggccacaactgattccaacatcctgtcttgttttgttacc 676
Query: 477 cgcacccccccacacacacacacacagaggcaaaaagcatcgtat 521
|||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 677 cgcacccccccacacacacacaca--gaggcaaaaagcatcgtat 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 919
Length adjustment: 10
Effective length of query: 511
Effective length of database: 909
Effective search space: 464499
Effective search space used: 464499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
