Query= MSMg01no514_h12.b1 MSMg01no514_h12.b1 CHROMAT_FILE:
MSMg01no514_h12.b1 PHD_FILE: MSMg01no514_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:23 2005
(644 letters)
>mm_chr10_44708613_44709657
Length = 1045
Score = 1015 bits (525), Expect = 0.0
Identities = 594/645 (92%), Gaps = 49/645 (7%)
Strand = Plus / Plus
Query: 1 attcctctccttcc-catctgccgttctgactttgcagtagaggctagtgtctgcccggc 59
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcctctcctaccacatctgccgttctgactttgcagtagaggctagtgtctgcccggc 260
Query: 60 ccttttccactcctggattccacattatccttctctcttacgggatggctccttctcttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttttccactcctggattccacattatccttctctcttacgggatggctccttctcttt 320
Query: 120 ggcattttgttaccaaaacttgaatcaaacattttaaacttttattgtgacaatgataat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcattttgttaccaaaacttgaatcaaacattttaaacttttattgtgacaatgataat 380
Query: 180 gacagtgagggcaaacaactccaattagtctgtcaataccatcattgttgaattaatctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagtgagggcaaacaactccaattagtctgtcaataccatcattgttgaattaatctg 440
Query: 240 gagattagcaatagccaatatacacataatttggtctccttaaaggagacagacatctgc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagattagcaatagccaatatacacataatttggtctccttaaaggagacagacatctgc 500
Query: 300 tttccttggcaacagtctgtttccaggcctttacttgataccatgtgcgtgcctaacccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttccttggcaacagtctgtttccaggcctttacttgataccatgtgcgtgcctaacccc 560
Query: 360 tgtttccaacaatggcttttatccttgaggtttggtagtatagttaattgatgcctttat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtttccaacaatggcttttatccttgaggtttggtagtatagttaattgatgcctttat 620
Query: 420 ctttacatgagagatgccagcttacatcaaaaaaaagaagaagaagaagaagaagaagaa 479
|||||||||||||||||||||| ||||||||||||| || || || || ||
Sbjct: 621 ctttacatgagagatgccagctcacatcaaaaaaaa-aa-aa-aa-aa-aa--------- 666
Query: 480 gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa 539
||||||||||||||||||||||||||
Sbjct: 667 ----------------------------------aagaagaagaagaagaagaagaagaa 692
Query: 540 gaagaaaagaggaaaaaaaccaccaaaaacatactacaaacacttggctttatattgctg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gaagaaaagaggaaaaaaaccaccaaaaacatactacaaacacttggctttatattgctg 752
Query: 600 gaactagagaagctcaaagctagattcagcattagagaaaaataa 644
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gaactagagaagctcaaagctagattcagcattagagaaaaataa 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1045
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1035
Effective search space: 656190
Effective search space used: 656190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_h12.g1 MSMg01no514_h12.g1 CHROMAT_FILE:
MSMg01no514_h12.g1 PHD_FILE: MSMg01no514_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:23 2005
(591 letters)
>mm_chr10_44900275_44901264
Length = 990
Score = 957 bits (495), Expect = 0.0
Identities = 540/563 (95%), Gaps = 15/563 (2%)
Strand = Plus / Minus
Query: 37 tctgatagagccttgccagctcccagcacatgatgtgaaataagagacctgcaagtgtct 96
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 tctgataaagccttgccagctcccagcacatgatgtgaaataagagacctgcaagtgtct 931
Query: 97 acttaaaggcatctcttagaattttcaacattctagcagcacttttccaatgaaggttgg 156
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 930 acttaaaggcatctcttagaattttcaacattctagcagcacctttccaatgaaggttgg 871
Query: 157 cattgctctgcctcaactgtttgattccccctcccccccccatatgcttgataacatcct 216
|||||||||||||||||||||||||| | |||||| ||||| |||||||||||||
Sbjct: 870 cattgctctgcctcaactgtttgatt-----t--ccccccgatatgtttgataacatcct 818
Query: 217 ttctttacccatttttagctcccttgcct--------cccagcacagctttgttaaatgc 268
||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 817 ttctttacccatttttagctcccttgcctccctttcccccagcacagctttgttaaatgc 758
Query: 269 acatattgctggtctgatgtctatgctaaagcagcattatctcccacttacctggtctcc 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 acatattgctggtctgatgtctatgctaaagcagcattatctcccacttacctggtctcc 698
Query: 329 agagctcatgccccccaccctcaccccaaggctgtgtttcagaacactatgtaagtgtgg 388
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 697 agagctcatgccccccaccctcaccccaaggctgtgcttcagaacactatgtaagtgtgg 638
Query: 389 cagattgctacactggcttcttcttccatctgacttctagcaaagattggtgtagagccc 448
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 637 cagattgctacactggcttcctcttccatctgacttctagcaaagattggtgtagagccc 578
Query: 449 tatcatatgagagactggccaggacatcagccgccttgacttgagcaggagctactgggt 508
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 577 tatcatatgagagactggccaggacatcagtcgccttgacttgaacaggagctactgggt 518
Query: 509 ttgagttgcgatgatttgatataatgcagctttattagtaatctcctggacaactcagtt 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ttgagttgcgatgatttgatataatgcagctttattagtaatctcctggacaactcagtt 458
Query: 569 ccatggaatttccatctatgcag 591
|||||||||||||||||||||||
Sbjct: 457 ccatggaatttccatctatgcag 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 990
Length adjustment: 10
Effective length of query: 581
Effective length of database: 980
Effective search space: 569380
Effective search space used: 569380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
