Query= MSMg01no514_m12.b1 MSMg01no514_m12.b1 CHROMAT_FILE:
MSMg01no514_m12.b1 PHD_FILE: MSMg01no514_m12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:48 2005
(684 letters)
>mm_chr10_64615581_64616668
Length = 1088
Score = 1214 bits (628), Expect = 0.0
Identities = 669/686 (97%), Gaps = 8/686 (1%)
Strand = Plus / Plus
Query: 5 gaattcaccaggt--tttcgtaaggattaaattgcatgaagttttatataatttgtggag 62
||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattcaccaggtagtt--gtaaggattaaattacatgaagttttatataatttgtggag 262
Query: 63 ttttaaaggaaattaccaagcattctttcccttcagtaaagatccaaaaagaatggtaca 122
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttttaagggaaattaccaagcattctttcccttcagtaaagatccaaaaagaatggtaca 322
Query: 123 gtatataaatagcaagagacgatgagagctttaggattctcctcacagccctagagaggt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtatataaatagcaagagacgatgagagctttaggattctcctcacagccctagagaggt 382
Query: 183 ggtagttagtaagaaaacacctcccatgccccagccagagcgttaagttaattgagcaag 242
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 383 ggtagttagtaagaaaacacctcccatgccccagccagagctttaagttaattgagcaag 442
Query: 243 tgcaggattgaatctggccaggatgacatatgaatattgtattttatttttttaaaagaa 302
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 443 tgcaggattgaatctggccaggatgacatatgaatattgtattttattttttaaaaagaa 502
Query: 303 agttagtctctcaggtagtgattattttggtgacacaactttctttgttgaagcataact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agttagtctctcaggtagtgattattttggtgacacaactttctttgttgaagcataact 562
Query: 363 ctattgatttattacccatctagctattgatgatagatattccattggtggacagatcct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctattgatttattacccatctagctattgatgatagatattccattggtggacagatcct 622
Query: 423 cacgcgttcacagcagctcagacaccttcattcactgtttgctttcctgcttcatgacaa 482
||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 623 cacacgttcacagcagctcagacaccttcatttagtgtttgctttcctgcttcatgacaa 682
Query: 483 aatacagggttgctcccaaaatccagttttattttaatgatgggagagatgtgctcaagc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aatacagggttgctcccaaaatccagttttattttaatgatgggagagatgtgctcaagc 742
Query: 543 tcatgaattattgcagcaagccatctggaaaaaaaaaaaa----gcaatgcaaccttacc 598
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 743 tcatgaattattgcagcaagccatctggaaaaaaaaaaaaaaaagcagtgcaaccttacc 802
Query: 599 atgcaccaagtgcattggtaaattatgttgccactcaacacaagctagggtcaccgtgga 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 atgcaccaagtgcattggtaaattatgttgccactcaacacaagctagggtcaccgtgga 862
Query: 659 ggagaaactttaatgagattgatcta 684
||||| ||||||||||||||||||||
Sbjct: 863 ggagacactttaatgagattgatcta 888
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1088
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1078
Effective search space: 726572
Effective search space used: 726572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_m12.g1 MSMg01no514_m12.g1 CHROMAT_FILE:
MSMg01no514_m12.g1 PHD_FILE: MSMg01no514_m12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:48 2005
(651 letters)
>mm_chr10_64754882_64755932
Length = 1051
Score = 1243 bits (643), Expect = 0.0
Identities = 649/651 (99%)
Strand = Plus / Minus
Query: 1 atatgtgaaagatacagcctctaggaatttaatccttacccaagctcagagtgaaaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 atatgtgaaagatacagcctctaggaatttaatccttacccaagctcagagtgaaaacca 604
Query: 61 agaaaagaagcatgtttggagagaaaatgaaggacaatatgatctgggagaggatagatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 agaaaagaagcatgtttggagagaaaatgaaggacaatatgatctgggagaggatagatt 544
Query: 121 aataataggaagaggcagcttggggtcctacagaccactggctaaggtttgttgcttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aataataggaagaggcagcttggggtcctacagaccactggctaaggtttgttgcttcct 484
Query: 181 gtttgatttgcttctggaattggattttggatttttagtcacaaaccttactcttagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gtttgatttgcttctggaattggattttggatttttagtcacaaaccttactcttagtta 424
Query: 241 attaacagaaactgagggaccacacgacatcatgtctatatcgtctaactggaaaaaatc 300
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 423 agtaacagaaactgagggaccacacgacatcatgtctatagcgtctaactggaaaaaatc 364
Query: 301 agtaaagtgaagagtcttcagtttgtctggttaagtagttgccattcagactaggtgcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 agtaaagtgaagagtcttcagtttgtctggttaagtagttgccattcagactaggtgcag 304
Query: 361 gcattcatggccctttggaaataagatccaatattaccaaagctgcagaaggagctggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gcattcatggccctttggaaataagatccaatattaccaaagctgcagaaggagctggat 244
Query: 421 acttaaatatttagataaagtttaccactaaaaaaattcatagggagccagagagatgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 acttaaatatttagataaagtttaccactaaaaaaattcatagggagccagagagatgga 184
Query: 481 ttatcagttaagagcacttgctgtaattaatacctgattgctacttatacattactcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttatcagttaagagcacttgctgtaattaatacctgattgctacttatacattactcatt 124
Query: 541 ttgtccctagtctcaggaaagaatgtttgattgccatgtgaatatgagttggtttaggcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttgtccctagtctcaggaaagaatgtttgattgccatgtgaatatgagttggtttaggcc 64
Query: 601 aaagggagctgtcactgttcctctaagaacttgctttataaggactgcttc 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aaagggagctgtcactgttcctctaagaacttgctttataaggactgcttc 13
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
