Query= MSMg01no515_d18.b1 MSMg01no515_d18.b1 CHROMAT_FILE:
MSMg01no515_d18.b1 PHD_FILE: MSMg01no515_d18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:27 2005
(640 letters)
>mm_chr10_70622758_70623798
Length = 1041
Score = 1193 bits (617), Expect = 0.0
Identities = 632/637 (99%), Gaps = 1/637 (0%)
Strand = Plus / Plus
Query: 5 gaattccatccctctccatactcagaatactccaaacttagatcaagttcaccccaaagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatccctctccatactcagaatactccaaacttagatcaagttcaccccaaagt 264
Query: 65 gctcaaagggtatgctcccaagtccagtcctatttacagaccctcagaacaccctgagtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctcaaagggtatgctcccaagtccagtcctatttacagaccctcagaacaccctgagtc 324
Query: 125 tgtcccacaagcctgaatgagaatagagagtaataaaaggagatctggggacaagaggga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtcccacaagcctgaatgagaatagagagtaataaaaggagatctggggacaagaggga 384
Query: 185 ttgatgaccaactcttgcagatgtcagagtagacttgacttgtgtgcacctaatcggtcc 244
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgatgaccaacttttgcagatgtcagagtagacttgacttgtgtgcacctaatcggtcc 444
Query: 245 aatccaaagataccttcgccagatgtgcccttctctgactttaatttcaggctttgattc 304
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 aatccaaagataccttcgccagatgtgcccttctctgactttaatttcaggccttgattc 504
Query: 305 aacaagacactactttcgccaccttaagcatctatctctgtctgagatcacagaaatggc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacaagacactactttcgccaccttaagcatctatctctgtctgagatcacagaaatggc 564
Query: 365 tggctcattctctagacaggttgggagctcctctctgttctaggcggcccacagatgaaa 424
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tggctcattctctagacaggctgggagctcctctctgttctaggcggcccacagatgaaa 624
Query: 425 gcctcgcaacttctgatgctgactgcccgccagcccacgcaccatcactctcaaagcaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 625 gcctcgcaacttctgatgctgactgcccgccagcccacgcaccatcactctcaaagcgga 684
Query: 485 gcatagagctcagag-atgaagtcctgctgtgagcttggaacactcgcccccacgccaca 543
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcatagagctcagaggatgaagtcctgctgtgagcttggaacactcgcccccacgccaca 744
Query: 544 cagaatcgtactgccttttattaaatgaccaaacgcacaagagtatctgttctacgtagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cagaatcgtactgccttttattaaatgaccaaacgcacaagagtatctgttctacgtagg 804
Query: 604 aggatgatggtgttaaatatggtagaaaagcactgtg 640
|||||||||||||||||||||||||||||||||||||
Sbjct: 805 aggatgatggtgttaaatatggtagaaaagcactgtg 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1041
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1031
Effective search space: 649530
Effective search space used: 649530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_d18.g1 MSMg01no515_d18.g1 CHROMAT_FILE:
MSMg01no515_d18.g1 PHD_FILE: MSMg01no515_d18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:28 2005
(548 letters)
>mm_chr10_70754858_70755805
Length = 948
Score = 1011 bits (523), Expect = 0.0
Identities = 543/555 (97%), Gaps = 9/555 (1%)
Strand = Plus / Minus
Query: 1 tgtaagcagaagcactccaggaggaagctcattgctcctgagaaggttccagaaagttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tgtaagcagaagcactccaggaggaagctcattgctcctgagaaggttccagaaagttcc 608
Query: 61 agttctttctgcctccgctgacaatttctgctgttctgtaccaagttcaaacagggcctc 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 agttctttccgcctccgctgacaatttctgctgttctgtaccaagttcaaacagggcctc 548
Query: 121 agtcaacactggacccataaaaagacaccagagggtccctacccaaagatgtaaccccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agtcaacactggacccataaaaagacaccagagggtccctacccaaagatgtaaccccag 488
Query: 181 agtcttctaacctgcagctgacagtgtgggattcaagagccaacaccccagacagctgtt 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 agtcttctgacctgcagctgacagtgtgggattcaagagccaacaccccagacagctgtt 428
Query: 241 gggagcgtatgaacgatgagtgatgcttgtaatgtgtgtgagccaaacacctgttgccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gggagcgtatgaacgatgagtgatgcttgtaatgtgtgtgagccaaacacctgttgccag 368
Query: 301 ccatttccagccctcctgctaaagccccgcctcctggggattctggttttactgctctgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ccatttccagccctcctgctaaagccccgcctcctggggattctggttttactgctctgg 308
Query: 361 gacctctaaaccacaagcaggaaaaggctctgttgtatatgaaggccagggtggcctaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gacctctaaaccacaagcaggaaaaggctctgttgtatatgaaggccagggtggcctaga 248
Query: 421 agctaagagctctctcttaggacaattgagagctcctgacagcccatggggcggggccgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agctaagagctctctcttaggacaattgagagctcctgacagcccatggggcggggccgg 188
Query: 481 gggcgggggaggcggggccgggccgggccgggccccggg---------gggggggcggcg 531
||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 187 gggcgggggaggcggggccgggccgggccgggcccggggtggggtggggggggggcggcg 128
Query: 532 gaggggtgcgggggg 546
|||||||||||||||
Sbjct: 127 gaggggtgcgggggg 113
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
