Query= MSMg01no515_p22.b1 MSMg01no515_p22.b1 CHROMAT_FILE:
MSMg01no515_p22.b1 PHD_FILE: MSMg01no515_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:33 2005
(575 letters)
>mm_chr10_17242708_17243682
Length = 975
Score = 1081 bits (559), Expect = 0.0
Identities = 568/571 (99%)
Strand = Plus / Plus
Query: 5 gaattcaacaaagtaacatataaagtggccagtcaagctcctgcacagagctgcctgtgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacaaagtaacatataaagtggccagtcaagctcctgcacagagctgcctgtgc 264
Query: 65 tctgagatcccgggcaggagctccgagccagcccttaaaggcctatgatgctcaccagtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctgagatcccgggcaggagctccgagccagcccttaaaggcctatgatgctcaccagtg 324
Query: 125 cttcacaggccttctttcttcttccttcacttgtcattactttggcttcttctcgagtac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttcacaggccttctttcttcttccttcacttgtcattactttggcttcttctcgagtac 384
Query: 185 agtgactctgaagaatctagaaagaaggtggcttccagctcagcagctacagaaggtctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtgactctgaagaatctagaaagaaggtggcttccagctcagcagctacagaaggtctg 444
Query: 245 gagagcactagccttggtgaagaaaacttgctctccatggtccttgaacccacgactctg 304
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 445 gagagcactagccttggtgaagaaaacttgctctccgtggtccttgaacccacgactctg 504
Query: 305 agtgtgctctaagctaagtgtgtgatgacccagaaggaacaacgaaggtcttcacgggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 505 agtgtgctctaagctaagtgtgtgatgacccagaaggaacaacgaaggtcttcaccggca 564
Query: 365 cgcaatccaagggcagccttgttccaactttgtgtcatgggtgacgttcttcctggtaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cgcaatccaagggcagccttgttccaactttgtgtcatgggtgacgttcttcctggtaga 624
Query: 425 atggaacattttagactgcatttctttgatggagctttaaaaccttgcaagatccatttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atggaacattttagactgcatttctttgatggagctttaaaaccttgcaagatccatttg 684
Query: 485 ttcttaaaagctcaacttccttcctgttgagaagctccataaataaagattgccagcatg 544
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tccttaaaagctcaacttccttcctgttgagaagctccataaataaagattgccagcatg 744
Query: 545 tgggtagagtcagggtcgcttgatgcttcca 575
|||||||||||||||||||||||||||||||
Sbjct: 745 tgggtagagtcagggtcgcttgatgcttcca 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_p22.g1 MSMg01no515_p22.g1 CHROMAT_FILE:
MSMg01no515_p22.g1 PHD_FILE: MSMg01no515_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:33 2005
(340 letters)
>mm_chr10_17399202_17399942
Length = 741
Score = 598 bits (309), Expect = e-175
Identities = 333/341 (97%), Gaps = 1/341 (0%)
Strand = Plus / Minus
Query: 1 cccaagatggtagttgtttggcttgaaggtcagtcttgtacaacagtgttatagacttac 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 657 cccaagatggtagttgtttggcttgaaggtcagtcttatacaacagtgttatagacttac 598
Query: 61 ttgttaaaagaaggttctgtgatcactgctatatgccaggcactgttatagatgcttgaa 120
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 597 ttgttaaaagaaggttctgtgatcactactatatgccaggcactgttctagatgcttgaa 538
Query: 121 aaagtcgttcaagatctcaatcttcgtgtgtgcaatgatgatggtacttacattaaataa 180
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 537 aaagtcgttcaagatctcaatctttgtgtgtgcaatgatgatggtacttatattaaataa 478
Query: 181 cgtggaacttaggaaagacacgaaaatcac-ttttttctttatcttcctctcttactttt 239
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 477 catggaacttaggaaagacacgaaaatcactttttttctttatcttcctctcttactttt 418
Query: 240 ttcttgatccagcattcacaatacctaaacattgtcttaagaattcttgccagagaacca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttcttgatccagcattcacaatacctaaacattgtcttaagaattcttgccagagaacca 358
Query: 300 gtaatgatacataacagtttgcagacaggagcctagtataa 340
|||||||||||||||||||||||||||||||||||| ||||
Sbjct: 357 gtaatgatacataacagtttgcagacaggagcctagcataa 317
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 741
Length adjustment: 9
Effective length of query: 331
Effective length of database: 732
Effective search space: 242292
Effective search space used: 242292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
