Query= MSMg01no516_n05.b1 MSMg01no516_n05.b1 CHROMAT_FILE:
MSMg01no516_n05.b1 PHD_FILE: MSMg01no516_n05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:42 2005
(645 letters)
>mm_chr10_9026044_9027088
Length = 1045
Score = 1141 bits (590), Expect = 0.0
Identities = 629/642 (97%), Gaps = 1/642 (0%)
Strand = Plus / Plus
Query: 5 gaattcttagaggtcttatagagctgatgctttgcaatttggccagaata-tttttttta 63
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 204 gaattcttagaggtcttatagagctgatgctttgcaatttggccagaatattttttttta 263
Query: 64 atttaaaaaagtattacgtttatttattttattatttatttatgcatgtgtgcacaccag 123
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 264 attttaaaaagtattacgtttatttattttattatttatttatgcatgtgtgcacacctg 323
Query: 124 tgtggcgtgtcatacatgtggatgtaagaggaaaacctggagagttaattctctttctac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 324 tgtggcgtgtcatacatgtggatgtaagaggaaaacctggagagttaattctccttctat 383
Query: 184 catatggggtctggacccatatctccatatgattattgtacttggagacaagcatcttta 243
|||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||
Sbjct: 384 catatggggtctggacccatatttccatatgactattgcacttggagacaagcatcttta 443
Query: 244 cccactggtctatcttatcagtcgcccaagtatttattaggcacatcactttaactagct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cccactggtctatcttatcagtcgcccaagtatttattaggcacatcactttaactagct 503
Query: 304 ttatggggagacttgtgacaaattttgcagcatttctgacttccaataacatgtatgtat 363
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 504 ttatggggagacttgtgacaaattttgcagcatttctgacttccaataatatgtatgtat 563
Query: 364 atacataatttttaatatatataatataaaaatcaggatttgatagggcagcttctagaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atacataatttttaatatatataatataaaaatcaggatttgatagggcagcttctagaa 623
Query: 424 atttctttttaacagtatataaagaaagcagaaaaatttaaatataatttgaactatttt 483
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 624 atttctttttaacagtatataaagaaagcagaaaaattaaaatataatttgaactatttt 683
Query: 484 ttgaataatggctaaaaattcatcattcaagacaccctatattgtggttatagaacatgg 543
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 684 ttgaataatggctaaaaattcatcattcaagacaccctacattgtggttatagaacatgg 743
Query: 544 agaatttaagctaatattcagaaggaaacttctcttgacaggctagtgtcttcagcacca 603
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agaatttaagctagtattcagaaggaaacttctcttgacaggctagtgtcttcagcacca 803
Query: 604 caagacaccaaccagctacttgggagaaaagtcagcagcaat 645
||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 804 caagacaccaaccagctacttgggagaaaagtcagcaacaat 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_n05.g1 MSMg01no516_n05.g1 CHROMAT_FILE:
MSMg01no516_n05.g1 PHD_FILE: MSMg01no516_n05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:42 2005
(624 letters)
>mm_chr10_9187894_9188917
Length = 1024
Score = 932 bits (482), Expect = 0.0
Identities = 500/506 (98%), Gaps = 1/506 (0%)
Strand = Plus / Minus
Query: 1 tttttgcaaggagaaatgtgattgttataaattgtaacccttaagatggacacaggaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tttttgcaaggagaaatgtgattgttataaattgtaacccttaagatggacacaggaaag 447
Query: 61 ttgggttgtttgtgtttatatttaaggaagtagcaagtttatatataactcacagaagtc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttgggttgtttgtgttcatatttaaggaagtagcaagtttatatataactcacagaagtc 387
Query: 121 tgtgggaaattatatcaagtgaaaaaattacctagtttttacaacaacaacaaaaaacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tgtgggaaattatatcaagtgaaaaaattacctagtttttacaacaacaacaaaaaacta 327
Query: 181 caaagacaaaagaggatggtacagtcacagagcaaaaccagccaagtcagagaaagaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 caaagacaaaagaggatggtacagtcacagagcaaaaccagccaagtcagagaaagaggg 267
Query: 241 tagtatgaacattcatggcttccaagctaaaatacaaataaaaattgtcccagcagagaa 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 266 tagtatgaacattcatggcttccaagctaaaatacaaataaaaaatgtcccagcagagaa 207
Query: 301 atagacacatttgttagtatgtttgatgatcttaagtgattgctgttaaaactgaaggtg 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 206 acagacacatttgttagtatgtttgatgatcttaagtgattgctgttaaaactgaagttg 147
Query: 361 tgataatgctattctggttgtgacttgtcaagaatgcccccgctttgagagatatataca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 146 tgataatgctattctggttgtgacttgtcaagaatgcccccgctttgagagatgtataca 87
Query: 421 cactagtatttagatatgatattatatctggaaatacattt-aaaataaccctacaagta 479
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 86 cactagtatttagatatgatattatatctggaaatacattttaaaataaccctacaagta 27
Query: 480 gtgtatgtatgacagtagatgaaagt 505
||||||||||||||||||||||||||
Sbjct: 26 gtgtatgtatgacagtagatgaaagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
