MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-517D05
Chromosome	10 (Build37)
Map Location	69,466,193 - 69,466,653
singlet/doublet	singlet
Overlap gene	Ank3
Upstream gene	A930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371, LOC100039734, 5730416O20Rik
Downstream gene	Ccdc6, 2310015B20Rik, Slc16a9, LOC632955, 1200015N20Rik, LOC665398, Phyhipl, EG665429, Bicc1
Link	Open Mouse BAC browser

Click to get alignment info.

name	A930033H14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320700 MGI:2444562
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs

name	Rhobtb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69288 MGI:1916538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040182 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 229 ESTs, 5 Proteins

name	Cdc2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12534 MGI:88351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039696 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039696
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG382371 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382371 MGI:3647771
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Ank3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11735 MGI:88026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 9 mRNAs

name	LOC100039734 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	5730416O20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70557 MGI:1917807
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76551 MGI:1923801
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 218 ESTs, 2 Proteins

name	2310015B20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69563 MGI:1916813
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Slc16a9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66859 MGI:1914109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC632955 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:632955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	1200015N20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71721 MGI:1918971
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665398 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665398
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Phyhipl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70911 MGI:1918161
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665429 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665429 MGI:3647372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	Bicc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83675 MGI:1933388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhobtb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486808 GeneID:69288 MGI:1916538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho-related BTB domain containing 1 transcript_id : NM_001081347.1

name	LOC100040182 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260928 GeneID:100040182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 229 ESTs, 5 Proteins product : similar to ribosomal protein L30 transcript_id : XM_001475086.1

name	Cdc2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803421 GeneID:12534 MGI:88351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell division cycle 2 homolog A (S. pombe) transcript_id : NM_007659.3

name	LOC100039696 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260909 GeneID:100039696
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039696 transcript_id : XM_001473349.1

name	EG382371 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260913 GeneID:382371 MGI:3647771
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG382371 transcript_id : XM_356468.5

name	Ank3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256496 GeneID:11735 MGI:88026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin 3, epithelial transcript_id : NM_146005.3

name	Ank3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256494 GeneID:11735 MGI:88026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin 3, epithelial transcript_id : NM_170688.2

name	Ank3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256492 GeneID:11735 MGI:88026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin 3, epithelial transcript_id : NM_170689.2

name	Ank3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256502 GeneID:11735 MGI:88026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin 3, epithelial transcript_id : NM_170690.2

name	Ank3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256504 GeneID:11735 MGI:88026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin 3, epithelial transcript_id : NM_170729.2

name	Ank3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256490 GeneID:11735 MGI:88026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin 3, epithelial transcript_id : NM_170728.2

name	Ank3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256498 GeneID:11735 MGI:88026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin 3, epithelial transcript_id : NM_170730.2

name	LOC100039734 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260915 GeneID:100039734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001473400.1

name	Ank3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256500 GeneID:11735 MGI:88026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin 3, epithelial transcript_id : NM_170687.3

name	Ank3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256495 GeneID:11735 MGI:88026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin 3, epithelial transcript_id : NM_009670.4

name	5730416O20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260930 GeneID:70557 MGI:1917807
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730416O20 gene transcript_id : XM_001475149.1

name	Ccdc6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388259 GeneID:76551 MGI:1923801
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 218 ESTs, 2 Proteins product : coiled-coil domain containing 6, transcript variant 1 transcript_id : XM_618775.3

name	2310015B20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388263 GeneID:69563 MGI:1916813
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : RIKEN cDNA 2310015B20 gene transcript_id : XM_483917.4

name	Slc16a9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386743 GeneID:66859 MGI:1914109
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 16 (monocarboxylic acid transporters), member 9 transcript_id : NM_025807.2

name	LOC632955 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94388265 GeneID:632955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC632955 transcript_id : XM_920293.2

name	1200015N20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343632 GeneID:71721 MGI:1918971
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200015N20 gene transcript_id : NM_024244.3

name	Phyhipl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803106 GeneID:70911 MGI:1918161
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phytanoyl-CoA hydroxylase interacting protein-like transcript_id : NM_178621.3

name	EG665429 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388267 GeneID:665429 MGI:3647372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : predicted gene, EG665429 transcript_id : XM_976882.1

name	Bicc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130749 GeneID:83675 MGI:1933388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bicaudal C homolog 1 (Drosophila) transcript_id : NM_031397.2

name	Rhobtb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486809 GeneID:69288 MGI:1916538
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : Rho-related BTB domain containing 1 protein_id : NP_001074816.1

name	LOC100040182 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260929 GeneID:100040182
definition	codon_start : 1 product : similar to ribosomal protein L30 protein_id : XP_001475136.1

name	Cdc2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542366 CCDS:CCDS23908.1 GeneID:12534 MGI:88351
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0030544 - Hsp70 protein binding [Evidence IPI]; GO:0016301 - kinase activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0007095 - mitotic G2 checkpoint [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] codon_start : 1 note : cell division cycle control protein 2a; cell cycle p34 CDC2 kinase protein product : cell division cycle 2 homolog A protein_id : NP_031685.2

name	LOC100039696 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260910 GeneID:100039696
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473399.1

name	EG382371 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260914 GeneID:382371 MGI:3647771
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_356468.5

name	Ank3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116256497 CCDS:CCDS23909.1 GeneID:11735 MGI:88026
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0050808 - synapse organization and biogenesis [Evidence IMP] codon_start : 1 note : isoform b is encoded by transcript variant 2; brain-specific ankyrin-G product : ankyrin 3, epithelial isoform b protein_id : NP_666117.2

name	Ank3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25121946 GeneID:11735 MGI:88026
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0050808 - synapse organization and biogenesis [Evidence IMP] codon_start : 1 note : isoform c is encoded by transcript variant 3; brain-specific ankyrin-G product : ankyrin 3, epithelial isoform c protein_id : NP_733789.1

name	Ank3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116256493 GeneID:11735 MGI:88026
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0050808 - synapse organization and biogenesis [Evidence IMP] codon_start : 1 note : isoform d is encoded by transcript variant 4; brain-specific ankyrin-G product : ankyrin 3, epithelial isoform d protein_id : NP_733790.2

name	Ank3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116256503 CCDS:CCDS23910.1 GeneID:11735 MGI:88026
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0050808 - synapse organization and biogenesis [Evidence IMP] codon_start : 1 note : isoform e is encoded by transcript variant 5; brain-specific ankyrin-G product : ankyrin 3, epithelial isoform e protein_id : NP_733791.2

name	Ank3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116256505 GeneID:11735 MGI:88026
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0050808 - synapse organization and biogenesis [Evidence IMP] codon_start : 1 note : isoform h is encoded by transcript variant 8; brain-specific ankyrin-G product : ankyrin 3, epithelial isoform h protein_id : NP_733925.2

name	Ank3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116256491 GeneID:11735 MGI:88026
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0050808 - synapse organization and biogenesis [Evidence IMP] codon_start : 1 note : isoform a is encoded by transcript variant 1; brain-specific ankyrin-G product : ankyrin 3, epithelial isoform a protein_id : NP_733924.2

name	Ank3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116256499 CCDS:CCDS23911.1 GeneID:11735 MGI:88026
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0050808 - synapse organization and biogenesis [Evidence IMP] codon_start : 1 note : isoform i is encoded by transcript variant 9; brain-specific ankyrin-G product : ankyrin 3, epithelial isoform i protein_id : NP_733926.2

name	LOC100039734 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260916 GeneID:100039734
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473450.1

name	Ank3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86262153 CCDS:CCDS23912.1 GeneID:11735 MGI:88026
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0050808 - synapse organization and biogenesis [Evidence IMP] codon_start : 1 note : isoform f is encoded by transcript variant 6; brain-specific ankyrin-G product : ankyrin 3, epithelial isoform f protein_id : NP_733788.2

name	Ank3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129789 GeneID:11735 MGI:88026
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0050808 - synapse organization and biogenesis [Evidence IMP] codon_start : 1 note : isoform g is encoded by transcript variant 7; brain-specific ankyrin-G product : ankyrin 3, epithelial isoform g protein_id : NP_033800.2

name	5730416O20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260931 GeneID:70557 MGI:1917807
definition	codon_start : 1 product : hypothetical protein LOC70557 protein_id : XP_001475199.1

name	Ccdc6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82933144 GeneID:76551 MGI:1923801
definition	codon_start : 1 product : coiled-coil domain containing 6 isoform 1 protein_id : XP_618775.2

name	2310015B20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388264 GeneID:69563 MGI:1916813
definition	codon_start : 1 product : hypothetical protein LOC69563 protein_id : XP_483917.4

name	Slc16a9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229004 CCDS:CCDS23913.1 GeneID:66859 MGI:1914109
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 16 (monocarboxylic acid transporters), member 9 protein_id : NP_080083.2

name	LOC632955 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94388266 GeneID:632955
definition	codon_start : 1 product : hypothetical protein protein_id : XP_925386.2

name	1200015N20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29150265 GeneID:71721 MGI:1918971
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC71721 protein_id : NP_077206.2

name	Phyhipl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519957 CCDS:CCDS23914.1 GeneID:70911 MGI:1918161
definition	codon_start : 1 exception : mismatches in translation product : phytanoyl-CoA hydroxylase interacting protein-like protein_id : NP_848736.1

name	EG665429 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388268 GeneID:665429 MGI:3647372
definition	codon_start : 1 product : hypothetical protein protein_id : XP_981976.1

name	Bicc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13994223 CCDS:CCDS23915.1 GeneID:83675 MGI:1933388
definition	GO_function : GO:0003723 - RNA binding [Evidence ISS] codon_start : 1 note : polycystic kidney mutation of BALB/c origin; juvenile congenital polycystic kidney disease product : bicaudal C homolog 1 protein_id : NP_113574.1

name	LOC665398 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665398
definition	number : 1 pseudo : _no_value

name	A930033H14Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149260908 GeneID:320700 MGI:2444562
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs product : RIKEN cDNA A930033H14 gene transcript_id : XR_002305.2

clone name	MSMg01-454K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437J20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-419O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395D12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-515M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062D21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-517D05.T7 (MSMg01no517_d05.b1)	MSMg01-517D05.TJ (MSMg01no517_d05.g1)
ACC	AG589010	AG589011
length	759	1,087
length of high quality (start - end)	542 (40 - 581)	---
definition	CHROMAT_FILE: MSMg01no517_d05.b1 PHD_FILE: MSMg01no517_d05.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:49:12 2005	CHROMAT_FILE: MSMg01no517_d05.g1 PHD_FILE: MSMg01no517_d05.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:49:12 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC TGAGTGTTCCCTGTATTCTTGGGAATCCCGAACTGGAATTCTTTGCAGTT TTCGTCTGTGCGGACCCCCGCCACACTTCGTTAACCATGATGCTTTTAGT GAAACCTCCTTTGTCCGCTCCAGCTCTCCACTACCTTCAGTGACCAGAGG GACTTCTGGTCATTTCGGGGACTCTTTCCTAAAGTGTGCTAAGTCTTGTC TTTTCTAATGACTTTTAATATATACATGTAATGTATATATAATGTATATA TTTATTTAAATATATTTGTATATCTCATATCTTATATAGTTATTTTTTAC TAGTTTTAACACAAACCATTTGTTTTATCTGGTAGCTCACACATTATTAT TAATATCATGCTTACTGCACAGGGAAGGCAGAGGTTAGAGCATTATATTT TATGTTAATGTTGACGAGCAGATATAAGCTCTGTCATCCTAGTGGGACAC AGAGATGGGGCTAAAGTGCCCTTTGCCCTCTGCAGGAGCTGCTTCGGCCA AAGAGCCAAGTTATTGATAACTTTGTTTCTCAAAAGAGGTTTCCTAATCT CTGCCAAGATTAGGTTCCCTAATCTCTATCTTGGAGTTGCAACTGGAAGA AAAAGTTGAACAGCCAAATGGAACTTTGCGGTTAGGATATAATATTCCCA GGTCTTGCGTTCCCACTGAGGGTCCTTTACCGGCGCCCATTGCATTATCA AGTTTATTN	TCTTGGCCTCTCCCTCGCGCGCCCGNCAAGTGTTTTTTCTCCAAAAAAGG AGGGGGGGAANAAAGGAAGTTTTCCTCCAAAAAAAGTAAAGACTAGAGAG ACGCCCGACTATACGACCCTACCACACAATGGTTACTTATATAGACAACC ATGCCGCAGGCGCTCCGCGCCGCAATCAACAACGTCCATGAGAAGTATTT TCATAGACGAGTATCGTTGGAGCAGTATTTCTTTTAGTTGTGACAGATCA GCAACACACACTAGCATTGTATACCATCCGTAGTGCTGGCGCTCGTCGCG AGTCTTGAGTGTGAATGACCCCGATCCGGAGCGCCGTGCGTCATCATTTT ACCGATCGCAGAGTCAGTTTTTTACTTCACACGCCCCACGTGAACAGAGG GAAGGGGCCATACACTCATATTACATCAAGTAAACTGAGAATAGAGGAAA CGCGTGGCGATAACTATTTAAATAGACACCACTCCCTCGGCACCCCGAAG GGCGGCTCTAGAAAGTTCGCCCCCGATATTCAGCATAAAAACGCTACCTC TCTCACGCGCCCGTTTTGAGTGGGGCGCCCCCCACCACAATTATATAAAT ATGACGTGCAGCGCGTGAGTTTCTTAACCCGACGAACCGTGAAATTACAG TTTATCATTACGAGCTCACGTTTTGTGTCGAGAGTAATCCCAACCAACCT AGCATCCGTTACCCACATTCACTGCATGCAGACACGTGACGTTCGACGGG TTCCTCCAGGAGGCGAACGACGACGACGGAGCGATTGGGTGACTACGCGG GGCGTAATGTCGCTCGCTTTGGCCACGACGCTAAAGTTATAAGCCGAATA CCCCACCGCCACCGAATGTGTTGCCCAGGTTATACACACCCTCTAGGGAC CGGCGGGCGTCTTTTACAGGCGGAGGGTGAAGCTCATTAAGCTGCTGAGT GTATTCGCCCCCCATGTGATTGGCATATCGCCACCTCCTCCGTTAATATT CTCCACACTCCTTTCAGACCGCCGCCCTGAGTAATCTCTAACCGCGCGTA AAACCCACTCACGCGTTCACCCCCGCCCCCCTATATG
quality values	Open. Hide. 10 10 21 13 13 8 8 6 6 8 10 9 9 9 10 15 30 30 48 34 34 32 28 28 14 18 9 9 7 8 9 9 9 10 9 9 10 13 19 23 43 37 37 22 19 19 22 37 30 41 43 43 27 19 8 6 6 6 6 9 9 17 16 36 39 39 40 48 43 39 39 59 36 36 36 36 42 42 48 48 59 59 59 57 57 47 47 42 42 48 48 59 59 48 47 47 47 47 50 57 59 59 48 48 48 48 48 50 54 54 57 57 57 57 48 48 57 57 47 47 47 41 41 57 57 57 57 57 48 48 57 59 59 57 57 57 47 50 50 50 50 50 50 54 59 59 57 68 68 68 68 68 57 57 57 57 57 57 57 57 59 59 59 52 52 52 59 59 52 52 52 52 57 57 57 59 57 57 57 57 57 57 59 57 57 57 57 52 52 57 57 57 57 57 57 52 52 52 57 57 68 68 68 68 68 68 68 59 59 52 52 52 59 59 57 57 57 59 52 52 52 57 52 57 57 59 57 57 57 59 59 59 68 62 62 62 68 68 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 68 62 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 52 52 57 57 57 59 57 57 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 54 54 50 50 50 52 52 52 52 57 59 59 57 57 57 59 57 59 57 57 57 57 59 59 59 59 59 59 57 50 48 48 48 50 50 54 57 46 43 43 39 39 43 43 44 48 47 47 43 47 44 47 47 48 54 57 57 47 42 42 28 30 37 37 44 47 48 47 54 59 59 59 39 37 37 37 37 47 47 54 57 57 57 57 48 43 43 43 43 30 32 24 20 20 32 32 30 24 24 17 17 29 30 59 47 34 34 21 20 20 24 23 30 28 37 37 31 31 37 39 39 22 24 12 12 12 15 21 32 29 30 13 12 12 15 24 24 37 25 29 19 18 18 32 28 34 32 23 20 26 34 37 32 28 25 30 29 31 31 41 37 37 47 39 41 37 37 30 30 29 29 21 20 18 18 28 32 28 22 13 13 13 28 24 19 20 20 24 32 37 33 33 33 28 28 29 37 33 26 30 19 22 21 16 15 14 19 11 12 11 17 13 22 13 15 13 16 16 20 20 30 28 28 13 13 13 19 14 19 12 13 9 9 9 13 10 18 33 23 21 18 21 19 14 14 17 25 26 30 30 28 34 24 24 17 17 17 14 12 18 11 11 11 15 19 16 15 12 10 10 9 8 10 8 8 8 8 12 11 12 15 16 19 17 15 10 10 9 9 12 16 32 28 9 9 8 8 8 8 13 10 10 11 11 11 11 10 8 8 10 10 10 10 10 10 10 10 13 17 17 17 13 13 10 14 15 18 20 15 11 9 8 8 8 11 8 9 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 10 8 8 9 8 9 9 10 11 8 9 9 11 12 12 15 12 13 12 13 16 19 11 10 11 8 3 0	Open. Hide. 17 24 24 24 19 9 9 9 9 15 15 11 13 8 9 9 9 13 13 7 7 7 8 17 3 0 3 8 10 8 8 8 8 8 9 9 9 10 8 6 6 6 6 10 13 13 11 6 6 6 6 6 6 8 9 12 15 12 12 3 0 3 12 8 8 6 6 6 6 8 7 7 7 6 6 6 8 8 8 10 8 9 10 8 8 8 9 9 9 10 8 8 6 6 6 8 8 10 8 8 8 8 8 8 9 11 6 6 6 6 6 6 8 8 11 10 12 10 10 10 8 8 8 8 10 8 9 8 8 8 8 10 8 8 8 10 10 10 8 8 9 9 10 10 10 12 10 8 8 6 6 8 8 8 6 6 8 6 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 10 11 8 8 8 8 8 8 8 6 6 8 8 8 8 8 10 15 13 11 10 12 11 13 9 8 8 8 8 8 9 9 8 10 8 8 8 8 8 8 8 8 9 9 10 6 7 6 8 8 8 8 8 8 8 8 12 12 18 11 10 9 8 8 6 7 8 8 9 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 6 6 6 6 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 13 10 10 11 14 10 8 8 6 6 8 8 8 8 8 8 8 8 8 10 10 12 13 10 8 8 8 8 8 10 10 8 8 8 11 15 10 8 6 6 6 6 7 7 7 9 10 10 10 10 14 11 10 10 11 13 10 11 10 9 9 9 9 8 10 8 8 8 6 6 8 8 8 6 6 8 8 9 10 6 6 6 8 8 6 8 6 6 6 6 8 8 8 8 8 8 8 7 7 11 8 8 8 8 8 8 6 8 6 6 6 6 8 9 9 9 9 8 8 8 8 6 6 8 8 8 6 6 8 6 6 8 8 8 8 8 8 10 10 8 8 8 6 8 8 8 8 10 10 8 6 6 6 6 10 8 9 13 10 8 8 8 10 13 11 11 9 9 9 8 8 8 9 9 12 18 13 14 10 10 8 8 8 8 8 8 10 8 8 7 6 8 8 19 19 14 10 9 10 11 8 10 8 8 8 8 8 8 10 8 8 8 8 8 8 8 10 10 13 13 13 10 10 8 8 8 6 6 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 7 7 8 8 8 6 6 7 6 9 12 22 12 10 10 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 12 10 10 10 10 10 8 8 8 8 8 9 11 11 10 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 6 7 8 8 8 8 8 6 6 8 8 8 8 9 6 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 7 8 8 8 6 8 7 6 8 8 15 12 11 10 9 9 9 9 10 8 8 8 8 6 6 8 8 10 10 10 9 8 6 6 6 8 8 10 12 11 11 13 10 10 9 9 9 8 8 6 6 8 8 8 9 9 6 6 6 6 8 8 9 9 9 9 9 17 15 8 8 8 6 6 6 8 8 6 6 9 9 11 10 10 10 10 10 11 10 10 10 10 8 8 6 6 6 8 8 12 12 12 12 8 10 7 7 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 9 9 9 9 6 6 6 8 8 8 8 11 10 11 8 10 8 8 8 8 9 9 9 9 10 10 10 12 11 9 9 9 10 9 9 8 8 8 6 6 6 8 8 6 6 8 8 9 9 8 8 8 6 6 10 8 8 8 8 8 8 8 6 6 6 6 6 6 6 6 8 10 6 6 6 6 8 8 8 8 10 10 10 8 8 9 11 10 10 8 8 8 8 8 6 8 6 6 8 8 9 9 9 9 10 8 8 8 8 8 8 8 8 8 8 8 10 9 9 8 8 8 8 8 8 6 6 10 7 14 18 18 8 8 6 6 6 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 11 14 11 10 10 10 10 10 10 12 13 10 11 8 8 8 8 8 8 8 10 10 13 11 10 13 10 8 6 6 8 8 8 8 10 10 10 10 10 10 10 11 11 10 10 10 11 9 9 10 10 8 8 8 8 8 8 8 8 8 10 10 9 10 8 8 8 8 8 8 9 6 6 6 6 10 11 6 6 8 8 8 10 8 11 9 7 8 8 8 8 6 6 8 8 11 8 8 8 8 8 8 10 10 9 9 9 8 8 10 8 6 6 6 6 12 9 9 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 14 13 13 13 13 11 11 9 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no517_d05.b1 MSMg01no517_d05.b1 CHROMAT_FILE:
MSMg01no517_d05.b1 PHD_FILE: MSMg01no517_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:12 2005
         (542 letters)



>mm_chr10_69465709_69466653
          Length = 945

 Score =  853 bits (441), Expect = 0.0
 Identities = 455/461 (98%), Gaps = 3/461 (0%)
 Strand = Plus / Minus

                                                                       
Query: 85  cacttcgttaaccatgatgcttttagtgaaacctcctttgtccgctccagctctccacta 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 cacttcgttaaccatgatgcttttagtgaaacctcctttgtccgctccagctctccacta 886

                                                                       
Query: 145 ccttcagtgaccagagggacttctggtcatttcggggactctttcctaaagtgtgctaag 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 ccttcagtgaccagagggacttctggtcatttcggggactctttcctaaagtgtgctaag 826

                                                                       
Query: 205 tcttgtcttttctaatgacttttaatatatacatgtaatgtatatataatgtatatattt 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 tcttgtcttttctaatgacttttaatatatacatgtaatgtatatataatgtatatattt 766

                                                                       
Query: 265 atttaaatatatttgtatatctcatatcttatatagttattttttactagttttaacaca 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 atttaaatatatttgtatatctcatatcttatatagttattttttactagttttaacaca 706

                                                                       
Query: 325 aaccatttgttttatctggtagctcacacattattattaatatcatgcttactgcacagg 384
            |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 705 gaccatttgttttatctggtagctcacacatcatttttaatatcatgcttactgcacagg 646

                                                                       
Query: 385 gaaggcagaggttagagcattatattttatgttaatgttgacgagcagatataagctctg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gaaggcagaggttagagcattatattttatgttaatgttgacgagcagatataagctctg 586

                                                                       
Query: 445 tcatcctagtgggacacagagatggggctaaagtgccctttgccctctgcaggagctgct 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tcatcctagtgggacacagagatggggctaaagtgccctttgccctctgcaggagctgct 526

                                                    
Query: 505 tcg---gccaaagagccaagttattgataactttgtttctc 542
           |||   |||||||||||||||||||||||||||||||||||
Sbjct: 525 tcggtagccaaagagccaagttattgataactttgtttctc 485


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 945
Length adjustment: 10
Effective length of query: 532
Effective length of database: 935
Effective search space:   497420
Effective search space used:   497420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information