XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ATTAACTAAACTCAAGAAAGTGTACAAAAAAAAAATCTAAATGTCACTGC
CCAATTGAAATACGAGCTAAAATGGAAATACTTTCTCCTACTTAAAACCC
AGACTGAATCACCTTCAAAATGACCTTTCACAATCTTTCCAATTTGCCTT
TGTTTAAACTGTCTGGGCCTAAAAGCAAGCATTATTCATTTTCTCTTGCC
CAAAGTGAACTTGTGTAAAGTAGGAAAATTAAAAGAAACTGCTAGAAATT
CCTTCCAACCAGTGGCTGACCCCTCTCACTAGCTCACAGCAAAGTCTCCT
CTGTTGATCTATCACCTAGTCTCATTTCGTTTGAATATTTACATTGTACC
TACTGCTAAACACTTGGCAGGAGGCTCCATCCATATCTCCTATCTGTGTC
TCTGTATCCTTAAACCTTGCAAACATCATACAGTGTATATTAAGTTTACA
GGAAAGCTCCAAATAGCATATCAGACCTGGTCTCTCTTTGTTAAAGATTT
AAGGAGCTATGGGAATCTGGATTACAACGCACATTTTGCTTCATTTATTT
TTATCACACTTTAAAGGCCAAGGGTGATGATTAACTTACAGACACTGAAT
TGATTTCCCTACTGAAACCTGAAAGTAATATTTGGNCATTCATTGTATGT
GTTTTACACAAAAAAACATCTTCTATTCAATTACTCCTGATATGTATTGA
AGGGGTTATTCA

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCA
CCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAA
CAACCCTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCAAAAAC
TCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGGGGAACACTCCT
CCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCT
GGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCCGCAATA
CCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGAACAC
ATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGA
AAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTAC
ATTTACACAATGGAATACTACTCAGCTATTAAAAAAATGAATTTATGAAA
TTCCTAGGCAAATGGATGGACCTGGAGGGTATCATCCTGAGTGAAGTAAC
CCAATCACAAAGGAACTCGCACAATATGTACTCACTGATAAGTGGATATT
AGCCCAGAAACTTANGATACCCAAGATATAAGATACAACTTGCCAAACGC
ATGAAATTCAAGAAGATTTACCCTTTCTTAGAAATGGGAACAAACACCCC
TAGAAAGAGT

Query= MSMg01no517_h05.b1 MSMg01no517_h05.b1 CHROMAT_FILE:
MSMg01no517_h05.b1 PHD_FILE: MSMg01no517_h05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:32 2005
         (579 letters)



>mm_chr10_87398686_87399665
          Length = 980

 Score = 1075 bits (556), Expect = 0.0
 Identities = 571/576 (99%), Gaps = 1/576 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattaactaaactcaagaaagtgtacaaaaaaaaaa-tctaaatgtcactgccca 63
           |||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 205 gaattcattaacaaaactcaagaaagcgtacaaaaaaaaaattctaaatgtcactgccca 264

                                                                       
Query: 64  attgaaatacgagctaaaatggaaatactttctcctacttaaaacccagactgaatcacc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attgaaatacgagctaaaatggaaatactttctcctacttaaaacccagactgaatcacc 324

                                                                       
Query: 124 ttcaaaatgacctttcacaatctttccaatttgcctttgtttaaactgtctgggcctaaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcaaaatgacctttcacaatctttccaatttgcctttgtttaaactgtctgggcctaaa 384

                                                                       
Query: 184 agcaagcattattcattttctcttgcccaaagtgaacttgtgtaaagtaggaaaattaaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcaagcattattcattttctcttgcccaaagtgaacttgtgtaaagtaggaaaattaaa 444

                                                                       
Query: 244 agaaactgctagaaattccttccaaccagtggctgacccctctcactagctcacagcaaa 303
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaaactgctagaaatcccttccaaccagtggctgacccctctcactagctcacagcaaa 504

                                                                       
Query: 304 gtctcctctgttgatctatcacctagtctcatttcgtttgaatatttacattgtacctac 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtctcctctgttgatctatcacctagtctcatttcgtttgaatatttacattgtacctac 564

                                                                       
Query: 364 tgctaaacacttggcaggaggctccatccatatctcctatctgtgtctctgtatccttaa 423
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 565 tgctaaacacttggcaggaggctccatccatatctcctatcggtgtctctgtatccttaa 624

                                                                       
Query: 424 accttgcaaacatcatacagtgtatattaagtttacaggaaagctccaaatagcatatca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 accttgcaaacatcatacagtgtatattaagtttacaggaaagctccaaatagcatatca 684

                                                                       
Query: 484 gacctggtctctctttgttaaagatttaaggagctatgggaatctggattacaacgcaca 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gacctggtctctctttgttaaagatttaaggagctatgggaatctggattacaacgcaca 744

                                               
Query: 544 ttttgcttcatttatttttatcacactttaaaggcc 579
           ||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttttgcttcatttatttttatcacactttaaaggcc 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space:   551930
Effective search space used:   551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)