Query= MSMg01no517_h17.b1 MSMg01no517_h17.b1 CHROMAT_FILE:
MSMg01no517_h17.b1 PHD_FILE: MSMg01no517_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:35 2005
(712 letters)
>mm_chr10_26338038_26339147
Length = 1110
Score = 1265 bits (654), Expect = 0.0
Identities = 695/710 (97%), Gaps = 5/710 (0%)
Strand = Plus / Plus
Query: 5 gaattctcacactactgtgagttttaatttcacttcattattgtgaacgcacatatatgt 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctcacactactgtgagtttttatttcacttcattattgtgaacgcacatatatgt 263
Query: 65 tgggagctattaaggcaacgctattgtcctgatctctgaattgggcctctcccccagaga 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 264 tgggagctattaaggcaacactattgtcctgatctctgaattgggcctctccccccgaga 323
Query: 125 agaaaagggtgtcaaaagcgggccaccagacgcaccaccgctctgagaaagtcagcgccg 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 324 agaaaagggtgtcaaaagcgggccaccagatgcaccaccgctctgagaaagtcagcgccg 383
Query: 185 gatgtcctgacctcaagatgtaccctgataccaccaagttcctgcttccccgtgtagtgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gatgtcctgacctcaagatgtaccctgataccaccaagttcctgcttccccgtgtagtgg 443
Query: 245 ccaaaagaaaaatttccgctgccccatccctgctgccaagaagtacttcctctctttccg 304
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 ccaaaagaaaaatttccgctgccccatccctgctgctgagaagtacttcctctctttccg 503
Query: 305 ctgccccatccctcctgctgaggtgcatttcctctgccccattcctcctgctgaaaggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgccccatccctcctgctgaggtgcatttcctctgccccattcctcctgctgaaaggca 563
Query: 365 cttccctttttgcttgtgcataaaaaatcgggcctggctaatacatttggggctttgatg 424
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 564 cttccccttttgcttgtgcataaaaactcgggcctggctaatacatttggggctttgatg 623
Query: 425 cattccagaacggtttccgtgtcgttattcgcacaaggccctcgtctctctct--aaccc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 624 cattccagaacggtttccgtgtcgttattcgcacaaggccctcgtctctctctctaaccc 683
Query: 483 cccacccatttggttattaggaggaggtcccttggagaccctcgaataactggacctgct 542
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccc-cccatttggttattaggaggaggtcccttggagaccctcgaataactggacctgct 742
Query: 543 ggacgggtcacatatacacatacatatatgtgtagcattgtgttattttcatacgtgtca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ggacgggtcacatatacacatacatatatgtgtagcattgtgttattttcatacgtgtca 802
Query: 603 ttataatttactcttattcatcctcctttgcatccccccacactgcctccccattgttgg 662
||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 803 ttataatttactcttattcatcctcctttgc--ccccccccactgcctccccattgttgg 860
Query: 663 tatgcttctccccttaatctataccccagtttcctgatgcatggatctca 712
|||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tatgcttctctccttaatctataccccagtttcctgatgcatggatctca 910
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 712
Length of database: 1110
Length adjustment: 10
Effective length of query: 702
Effective length of database: 1100
Effective search space: 772200
Effective search space used: 772200
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no517_h17.g1 MSMg01no517_h17.g1 CHROMAT_FILE:
MSMg01no517_h17.g1 PHD_FILE: MSMg01no517_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:35 2005
(583 letters)
>mm_chr10_26507808_26508790
Length = 983
Score = 835 bits (432), Expect = 0.0
Identities = 435/436 (99%)
Strand = Plus / Minus
Query: 1 ctaatcgatagtgtaagaaataaaagaaactgtttaaaaattttaggatctaacacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctaatcgatagtgtaagaaataaaagaaactgtttaaaaattttaggatctaacacaata 377
Query: 61 cactatcgtttctatagacaagcgatttaaatgtacgcactaagtcccaccccaaacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cactatcgtttctatagacaagcgatttaaatgtacgcactaagtcccaccccaaacaat 317
Query: 121 ggcaatcctaaactgaagataaaaagtaattttaaagaaatataaatatcttttatcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggcaatcctaaactgaagataaaaagtaattttaaagaaatataaatatcttttatcttt 257
Query: 181 tcttaatgtacttgttttttgttgttgttgttgttgctttaattcttagtagagaggtgg 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tcttaacgtacttgttttttgttgttgttgttgttgctttaattcttagtagagaggtgg 197
Query: 241 tggtatacacctttaatcccagcacttaggaggcagacaggcagatctcagagttccaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tggtatacacctttaatcccagcacttaggaggcagacaggcagatctcagagttccaag 137
Query: 301 acagccagaactactcagaaaaaccctgccttgaaaaaagaaacaaaaacaaaaaacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 acagccagaactactcagaaaaaccctgccttgaaaaaagaaacaaaaacaaaaaacaaa 77
Query: 361 acaaaacaaaaaacaaaaaaacaaacaaagacacaaagaaaacaaaacaaaaatgtttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 acaaaacaaaaaacaaaaaaacaaacaaagacacaaagaaaacaaaacaaaaatgtttcc 17
Query: 421 ttatttagataaaaac 436
||||||||||||||||
Sbjct: 16 ttatttagataaaaac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
