Query= MSMg01no518_a12.b1 MSMg01no518_a12.b1 CHROMAT_FILE:
MSMg01no518_a12.b1 PHD_FILE: MSMg01no518_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:19 2005
(523 letters)
>mm_chr10_71838093_71839015
Length = 923
Score = 530 bits (274), Expect = e-154
Identities = 304/314 (96%)
Strand = Plus / Plus
Query: 5 gaattctgtcttccctggatgctttctctctgtcattggctggagtatacagttgcattt 64
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 gaattctgtcttccctggatgctttctctctgtcattggctgtagtatacagttgcattg 264
Query: 65 tgcagatgtaggctgtaaccccatagagtcaactcttacttataatgaggcactcatgga 124
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 tgcagatgtaggctgtaaccccatagagtcaactcttacttataacgaggcactcatgga 324
Query: 125 cacagttgctgttgagaaccagtctaattcgtgaaggggactcctgctgtgcagggccca 184
|| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 cagtgttgctgttgagaaccagtctaatttgtgaaggggactcctgctgtgcagggccca 384
Query: 185 tcagcacttagactctttcttcccttttcctctggtgccttgaactgcatggatagatgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcagcacttagactctttcttcccttttcctctggtgccttgaactgcatggatagatgt 444
Query: 245 tctagatcaacgggtatattttaagctagaaaacgttgtgcattcaaacgaaactgagaa 304
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctagatcaactggtattttttaagctagaaaacgttgtgcattcaaacgaaactgagaa 504
Query: 305 aggacgaaaaggaa 318
||||| ||||||||
Sbjct: 505 aggacaaaaaggaa 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_a12.g1 MSMg01no518_a12.g1 CHROMAT_FILE:
MSMg01no518_a12.g1 PHD_FILE: MSMg01no518_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:19 2005
(667 letters)
>mm_chr10_71984024_71985090
Length = 1067
Score = 977 bits (505), Expect = 0.0
Identities = 535/545 (98%), Gaps = 1/545 (0%)
Strand = Plus / Minus
Query: 124 tcctggttgccttcagttgaagatgtagaactctcagctcctctactgccatgcctgcct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 tcctggttgccttcagttgaagatgtagaactctcagctcctctactgccatgcctgcct 1008
Query: 184 ggacactgccatat-tttccaccatgatgataatatactgaacctctgaacatgtaaggc 242
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 ggacactgccatatatttccaccatgatgataatatactgaacctctgaacatgtaaggc 948
Query: 243 agccccaattaaatattgttcttatgagcgttgccttggtcatggtgtctgttcacagaa 302
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 947 agccccaattaaatattgttcttatgagcgttgtcttggtcatggtgtctgttcacagca 888
Query: 303 ataaaaccctaaataagacaggagcatgtacatctcttcttttaaaaattgtaaaacttc 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 887 ataaaaccctaaataagacaggagcatgtacatctcttcttttaaaaattgtaagacttc 828
Query: 363 acagctggatctgctgtaggtatcagggaagatctggtcttacatgtttccagaatgctg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 acagctggatctgctgtaggtatcagggaagatctggtcttacatgtttccagaatgctg 768
Query: 423 ggtcaatgtttgaggctgctggagacgaaattttttttcattgtgtgatcatggtggact 482
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 767 ggtcaatgtttgaggctgctggagatgaatttttttttcattgtgtgatcatggtggact 708
Query: 483 tttaggtacagtgtatagaggcacctacagatgcttaatttcctccaatgtccagattca 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tttaggtacagtgtatagaggcacctacagatgcttaatttcctccaatgtccagattca 648
Query: 543 tgtgtctaaagtcctactatccagaatgctgtttgctttggaggtgttaggtcgactgag 602
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 647 tgtgtctgaagtcctactatccagaatgctgtttgctttggaggtgttaggtctactgag 588
Query: 603 acatggagttccagggagggtcactgggtccttacatgtggaggggcctttaaggcatgg 662
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 587 acatggagttccagggagggtcactgggtccttacaggtggaggggcctctaaggcatgg 528
Query: 663 tgcct 667
|||||
Sbjct: 527 tgcct 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
