Query= MSMg01no518_i05.b1 MSMg01no518_i05.b1 CHROMAT_FILE:
MSMg01no518_i05.b1 PHD_FILE: MSMg01no518_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:56 2005
(585 letters)
>mm_chr10_88039113_88040097
Length = 985
Score = 971 bits (502), Expect = 0.0
Identities = 562/582 (96%), Gaps = 2/582 (0%)
Strand = Plus / Minus
Query: 5 gaattccaaa-gtaaatgagtttaagaggtgcattgtctcgtgtccactcctggtgcgca 63
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gaattccaaagggaaatgagtttaagaggtgcattgtctcgtgtccactcctggtgcgcc 726
Query: 64 tggactcactgagggcttccacatgtgtgccagtgaacatgcaaaaaaccagcacaataa 123
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 725 tggactcactgagggcttccacatgtgtgccagtgaacaagcaaaaaaccaacacaataa 666
Query: 124 aatgtaaattcccagtccagcattttccaaccctctccgatcactaaagtcttccactga 183
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aatataaatgcccagtccagcattttccaaccctctccgatcactaaagtcttccactga 606
Query: 184 gcaagaccaagttttatacccaggtgaatctgctcccgagttttgaagtaacaaacacta 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 605 gcaagaccaagttttatacccaggtgaatctgctcccgagttttgaagtaacaaacacca 546
Query: 244 gggtgtctctatgactatgttgtaacattttgtttaaagaaatggtaagatttatccttg 303
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 545 gggtgtctctatgactatgttgtaatattttgtttaaagaaatggtaagatttatccttg 486
Query: 304 gttgaaagtaatgtatagtcactaaaatagtatttgttgtaaatattcgagtagatcaca 363
||||||||||||||| || |||||||||||||||||| ||||||||| |||||||||||
Sbjct: 485 gttgaaagtaatgtagagccactaaaatagtatttgtggtaaatatttaagtagatcaca 426
Query: 364 caaaatcctaccttctcagtaatttttaaactgcttatagtaaacattgtgggtacgtgg 423
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 425 caaaatcctaccttctcagtaatttttaaactgcttgtagtaaacattgtgggtacgtgg 366
Query: 424 atcttctgtatactgtgtatgaagtcaactaaggtcctctgaggccctattttgaaaagt 483
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 365 atcttccgtatactgtgtatgaggtcaactaaggtcctctgaggccctattttgaaaagt 306
Query: 484 gtacaatgtacattatttattcaaaccctagcctgcatgctttggggaggaagggtcaaa 543
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 g-acaatgtatattatttattcaaaccctagcctgcatgctttggggaggaagggtcaaa 247
Query: 544 gcttccaatactaccagctgcctccttaagcatgcaaagtat 585
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 246 gcttccaatactaccagctgcctctttaagcatgcaaagtat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_i05.g1 MSMg01no518_i05.g1 CHROMAT_FILE:
MSMg01no518_i05.g1 PHD_FILE: MSMg01no518_i05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:56 2005
(669 letters)
>mm_chr10_87913015_87914083
Length = 1069
Score = 1232 bits (637), Expect = 0.0
Identities = 661/669 (98%)
Strand = Plus / Plus
Query: 1 aggtcactgtgctgctacagcaagcacccaacctgctgagccatctcactgacctctcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtcactgtgctgctacagcaagcacccaacctgctgagccatctcactgacctctcta 260
Query: 61 agatgtttcctaagagactgctatgtcacatgaacgttcttcagatagtacgtgccactt 120
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||
Sbjct: 261 agatgtttcctaagagactgctatgtcacacgaatgttcttcagatagtacgtgccgctt 320
Query: 121 aacacatctttgccagcctgcctcatctccaccccatccctccatcagaccccaattcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacacatctttgccagcctgcctcatctccaccccatccctccatcagaccccaattcag 380
Query: 181 gatggtccttgaaccacagttgaggaaagtttgatatttgaagcagtgtgcgcctataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatggtccttgaaccacagttgaggaaagtttgatatttgaagcagtgtgcgcctataaa 440
Query: 241 acaaggtagtaacattgagaaaagaactgagggaagcaggcccgggaatttgcaacacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaaggtagtaacattgagaaaagaactgagggaagcaggcccgggaatttgcaacacag 500
Query: 301 tcttttggattttggaggaggaggaggagctagcaagaacaccgagaaggtacaggtgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttttggattttggaggaggaggaggagctagcaagaacaccgagaaggtacaggtgga 560
Query: 361 cgggagtgggagataagaggtgtgagggaaaatatcaaggactgtataagacagaagata 420
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 tgggagtgggagataagaggtgtgtgggaaaatatcaaggactgtataagacagaagata 620
Query: 421 gaaatgaaagagaaacgtacgggtggttaatggtgttggttgttgctaagtcaagcaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaatgaaagagaaacgtacgggtggttaatggtgttggttgttgctaagtcaagcaagg 680
Query: 481 atccgagatgatgagttataagcattttaaactaagcaagatgtggggggaaatcagtga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atccgagatgatgagttataagcattttaaactaagcaagatgtggggggaaatcagtga 740
Query: 541 aagggtctaaacataatctgccatatctaaagaaaatatctgtaaaccgcagtaatacca 600
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 741 aagggtctaaacataatctgccatatctaaagaaaatatctgtaaaccacagtaatgcca 800
Query: 601 gaatgtgaaggcgggtggggtatgtaaaaatgccagcaaacatacctgggtccaaagact 660
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 801 gaatgtgaaggcgggtggggtatgtaaaagtgccagcaaacatacctgggtccaaagact 860
Query: 661 tgcaatgag 669
|||||||||
Sbjct: 861 tgcaatgag 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
