AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCATAACTTCAAGTATGGCATATGGCTTCATTTTTGTTTTCATACTGTG
ATATTTATTATTTTTATGAAATAACATAAAGACTTCCACAGAGTATGCTG
TGTCTCAGCATACTAAAATTTGTTATACAGATACTAATATCCGTTTACAT
TATATCAACAAGATTGTTATTACACAATATGAACACTGGTACTCAATATA
ACTTTCCTACATAGACTCTCACCTTAGCTGGTCATTGACTTAAATAATTT
ACCCATTTTAAGAACATTGTTACGGATCAAGTAAACAAAAATCTCTAGAA
ATTAATACATAGGAGCACATTCCTGAATTACCAGGATTAGGAGGACTGAA
CCATAAGGGTTCCAAGGCCAGCCAGGGCTATTAAAGAAGGGGTATAACAA
AACCTACACAAAAATAGTGTTCATTTTCTTTAATGTAAAACAATGGAGAA
GACTAAGGCCAAATTGTCCTACTAAGGCACAATGTTTGTTCAGGATTAAT
ACTGGTATGAAGGTACTGGGAACCATGGGTATTTCAATACTTAAGAGCTC
TAAGATATATATTTTGGACCATTGAGTCTAATTTACTCATGCTTACTGGT
TCATCTGTATGGTGAATTGAAGCACTGTTTACTTTTGTATGTGCGCGCGC
GCGCGCGCGCGCGTGTGTGTGTGTGTGTGTAAATATAAGGATGAA

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTTTTAAT
GGGGTTGTTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGT
TGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAA
TCTGTTGGTGGTCTCTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAA
ACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCAC
AAGCCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCA
AGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTAT
GTGAAGTTCTTTGATCCATTTAGATTTGACCTTAGTACAAGGAGATAAGT
ATGGATCGATTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCAC
CATTTGTTGAAAATGCTGTCTTACTTCCACTGGATGGTTTTAGCTCCCTT
GTCGAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAA
TTCTATTCCATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTT
TTTACCACAATTGCTCTGTAGTAAAGCTTTANGTCCGGCATGGTGATTCC
ACCAGAGTTCTTTTATCCTTGAGAAGAGTTTTGCTATCCTN

Query= MSMg01no519_m21.b1 MSMg01no519_m21.b1 CHROMAT_FILE:
MSMg01no519_m21.b1 PHD_FILE: MSMg01no519_m21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:38 2005
         (616 letters)



>mm_chr10_15711903_15712918
          Length = 1016

 Score = 1168 bits (604), Expect = 0.0
 Identities = 610/612 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcataacttcaagtatggcatatggcttcatttttgttttcatactgtgatattta 64
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattcataacttcaagtatggcatatggcttcatttttgttttcatactctgatattta 264

                                                                       
Query: 65  ttatttttatgaaataacataaagacttccacagagtatgctgtgtctcagcatactaaa 124
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 ttatttttatgaaataacataaaggcttccacagagtatgctgtgtctcagcatactaaa 324

                                                                       
Query: 125 atttgttatacagatactaatatccgtttacattatatcaacaagattgttattacacaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttgttatacagatactaatatccgtttacattatatcaacaagattgttattacacaa 384

                                                                       
Query: 185 tatgaacactggtactcaatataactttcctacatagactctcaccttagctggtcattg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatgaacactggtactcaatataactttcctacatagactctcaccttagctggtcattg 444

                                                                       
Query: 245 acttaaataatttacccattttaagaacattgttacggatcaagtaaacaaaaatctcta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acttaaataatttacccattttaagaacattgttacggatcaagtaaacaaaaatctcta 504

                                                                       
Query: 305 gaaattaatacataggagcacattcctgaattaccaggattaggaggactgaaccataag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaattaatacataggagcacattcctgaattaccaggattaggaggactgaaccataag 564

                                                                       
Query: 365 ggttccaaggccagccagggctattaaagaaggggtataacaaaacctacacaaaaatag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggttccaaggccagccagggctattaaagaaggggtataacaaaacctacacaaaaatag 624

                                                                       
Query: 425 tgttcattttctttaatgtaaaacaatggagaagactaaggccaaattgtcctactaagg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgttcattttctttaatgtaaaacaatggagaagactaaggccaaattgtcctactaagg 684

                                                                       
Query: 485 cacaatgtttgttcaggattaatactggtatgaaggtactgggaaccatgggtatttcaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cacaatgtttgttcaggattaatactggtatgaaggtactgggaaccatgggtatttcaa 744

                                                                       
Query: 545 tacttaagagctctaagatatatattttggaccattgagtctaatttactcatgcttact 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tacttaagagctctaagatatatattttggaccattgagtctaatttactcatgcttact 804

                       
Query: 605 ggttcatctgta 616
           ||||||||||||
Sbjct: 805 ggttcatctgta 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)