NACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAACACCCCTTCATAATAAAAGCCCTGGAGAGATTAGGGATGC
AAGGGATGCACTTCAACATGTTAAAGTCAGTTTATAGCAAGCCCATAGCA
ACCATCGACTTAAGTGAAGAGAAACTCAAAACAATTCCACTAAAATCAGA
GATAGGCAAGGTTGTCCTCTCTCCATATGTGTTCAATATAGTAACTGAAG
TCTTAGTTATAGCAATAAGACAATTGAAGGGGCCAGGGGGATACAAATTG
GAAAGGAAGAAGTCAATATATCTTGACTTGAAGATGATATGATGATATAC
ATAAGAGATCCAAAAAATTCTATCAGAGAACTTTTACAGCTGATAAACAC
TTTCAGCAAAGAAGCAGGATATAAAGTCAATGTACAAAAATCAGTTACCC
TCCTATATCCAAATGGCAAATGGGCTGAGAAAGAAATCAGGAAAACAACA
CTATTCACAATAGCCTCAAAAATATAAAATATCCTGGGTTATCTGTAGTC
AAACAACTGAAAGATTTGTATGATAGAAACTCTGAGATACTGAAGAAAGA
AATTTAAGACTATATCAGGTGGAAAGATCTCCCAAGCTCGTAGATCAGTA
GAATTAATATAGTAAATATAGTTATCCTAACAAAAGCAATCCACAGATTT
AATGCAATCCTTATTAAAATTCTAATACAATTCTTCACAGATTTTGAAGG
GATACTTTT

NAACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGATGTCTGTCCTTGGATGCCTGA
GCACTGTTCTGGGCTGAGTCGTGGCATGGAGAAGGACCACAAATGTGACA
GAGCATCAGCTAATCTGGACGAGATGGTGCAGCTCTTCCGGTGCCAGCCA
CAGCGGGGAAGACAAGAATTTTCTTCTCCATCACTCGACTTATTTTCTAG
TTTTAAAACATCATCTGTTGTGGGGACGAAAGTAAGTTCAGTTTGCCGAG
ATTTTTTTTTCCTTTTGTCACAGGATGAGTGGCAGACATGTGGTTTTAGT
TGTAGTGGTTTTTAAAATCTAGAGGATCGCTATGTAAAGAGGCAGGTGAG
TGTCTGTCTAAAGTTGGATGTGGGTACTAGTACTGAGCACCAGTACCGGA
CTAATGTAACTGTTGCCTACAGCATTGAGGTAACTGGGGAGCACAGGACA
GGACTCTCAAGGAAATCAGAAATGAAAAGACAAGGAAGGGGGGCGGTCTT
ACTTTACTGAGGTGACATGTGGAGCTGATGACTAGAATACAGGGCATAGG
GTTGAGGTGTGCTTGGGATGAAAACAGAACCAGGCTTCCTTTGCAGCTGT
CCCCAAGCAGGACAGGAAGAGAGGAGCAGAAACTGAANGTAAAAGCTGTG
GGTTGCTGAGTANGAAACACCGAAGCAGTCTCATCATTTGTCTCCACAGA
ACCCTCTGAGACAACAGCATCT

Query= MSMg01no520_a18.g1 MSMg01no520_a18.g1 CHROMAT_FILE:
MSMg01no520_a18.g1 PHD_FILE: MSMg01no520_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:58 2005
         (523 letters)



>mm_chr10_115200476_115201401
          Length = 926

 Score =  944 bits (488), Expect = 0.0
 Identities = 516/526 (98%), Gaps = 3/526 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgatgtctgtccttggatgcctgagcactgttctgggctgagtcgtggcatggagaagga 60
           ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 726 tgatgtctgtccttgcatgcctgagcactgttctgggctgagtggtggcatggagaagga 667

                                                                       
Query: 61  ccacaaatgtgacagagcatcagctaatctggacgagatggtgcagctcttccggtgcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 666 ccacaaatgtgacagagcatcagctaatctggacgagatggtgcagctcttccagtgcca 607

                                                                       
Query: 121 gccacagcggggaagacaagaattttcttctccatcactcgacttattttctagttttaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gccacagcggggaagacaagaattttcttctccatcactcgacttattttctagttttaa 547

                                                                       
Query: 181 aacatcatctgttgtggggacgaaagtaagttcagtttg-ccgaga--tttttttttcct 237
           ||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||
Sbjct: 546 aacatcatctgttgtggggacaaaagtaagttcagtttgcccgagatttttttttttcct 487

                                                                       
Query: 238 tttgtcacaggatgagtggcagacatgtggttttagttgtagtggtttttaaaatctaga 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tttgtcacaggatgagtggcagacatgtggttttagttgtagtggtttttaaaatctaga 427

                                                                       
Query: 298 ggatcgctatgtaaagaggcaggtgagtgtctgtctaaagttggatgtgggtactagtac 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ggatcgctatgtaaagaggcaggtgagtgtctgtctaaagttggatgtgggtactagtac 367

                                                                       
Query: 358 tgagcaccagtaccggactaatgtaactgttgcctacagcattgaggtaactggggagca 417
           |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 366 tgagcaccagtaccagactaatgtaactgttgcctacagcatcgaggtaactggggagca 307

                                                                       
Query: 418 caggacaggactctcaaggaaatcagaaatgaaaagacaaggaaggggggcggtcttact 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 caggacaggactctcaaggaaatcagaaatgaaaagacaaggaaggggggcggtcttact 247

                                                         
Query: 478 ttactgaggtgacatgtggagctgatgactagaatacagggcatag 523
           ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 246 ttactgaggtgacatgtggagttgatgactagaatacagggcatag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 926
Length adjustment: 10
Effective length of query: 513
Effective length of database: 916
Effective search space:   469908
Effective search space used:   469908
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)