Query= MSMg01no520_b07.b1 MSMg01no520_b07.b1 CHROMAT_FILE:
MSMg01no520_b07.b1 PHD_FILE: MSMg01no520_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:00 2005
(693 letters)
>mm_chr10_100126595_100127691
Length = 1097
Score = 1321 bits (683), Expect = 0.0
Identities = 689/693 (99%), Gaps = 4/693 (0%)
Strand = Plus / Plus
Query: 5 gaattcagttgcatgattaattacatgacaaggatatgaacattttattaatttaacatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagttgcatgattaattacatgacaaggatatgaacattttattaatttaacatt 264
Query: 65 ttggtaactggaaaattaattataagatgaaagtctctcttccaaatgaatgactccttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttggtaactggaaaattaattataagatgaaagtctctcttccaaatgaatgactccttt 324
Query: 125 aaaatatttaataatcttcatctcactgaaatatattacattgttaaaaacctaaataat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaatatttaataatcttcatctcactgaaatatattacattgttaaaaacctaaataat 384
Query: 185 taaactgttacaatgattgcaaagctacatatttttattatttttctaaagggatatatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaactgttacaatgattgcaaagctacatatttttattatttttctaaagggatatatt 444
Query: 245 aaattaaatgttgcatgtttaagtatatgaatgtctaataataagagaggaattattctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaattaaatgttgcatgtttaagtatatgaatgtctaataataagagaggaattattctg 504
Query: 305 taggatccaaagttggttttctagaaaaagtatatattaattttggtaatgacagttttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taggatccaaagttggttttctagaaaaagtatatattaattttggtaatgacagttttt 564
Query: 365 cagagatgtcttaatattcaacctaaagtaataaaatattactatcgtacaaagctaaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagagatgtcttaatattcaacctaaagtaataaaatattactatcgtacaaagctaaat 624
Query: 425 cctttcataattaaaaact----atttcttttttcctgtgggagattttattttaaagtc 480
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctttcataattaaaaactctttatttcttttttcctgtgggagattttattttaaagtc 684
Query: 481 acatagactctgtattagtgtcctatcactataacaaaatatctaagatggtaaatcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acatagactctgtattagtgtcctatcactataacaaaatatctaagatggtaaatcatc 744
Query: 541 ttatgaaggaagtttattctttttttaaaaaagatatttttttagatttatttatttatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttatgaaggaagtttattctttttttaaaaaagatatttttttagatttatttatttatt 804
Query: 601 atataagtatattgtagctgtcttcagacaccacagaagagggcatcagatctcattacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atataagtatattgtagctgtcttcagacaccacagaagagggcatcagatctcattacg 864
Query: 661 gatggttgtgagccaccatgtggttgctgggat 693
|||||||||||||||||||||||||||||||||
Sbjct: 865 gatggttgtgagccaccatgtggttgctgggat 897
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1097
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1087
Effective search space: 742421
Effective search space used: 742421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_b07.g1 MSMg01no520_b07.g1 CHROMAT_FILE:
MSMg01no520_b07.g1 PHD_FILE: MSMg01no520_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:00 2005
(657 letters)
>mm_chr10_100328429_100329485
Length = 1057
Score = 1270 bits (657), Expect = 0.0
Identities = 657/657 (100%)
Strand = Plus / Minus
Query: 1 tctttatctggagtatgggtataatttatgaaactcacatttttggatccctaatcgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 tctttatctggagtatgggtataatttatgaaactcacatttttggatccctaatcgtca 798
Query: 61 ctccaaagaatcaagggacaatcattccaagagtgtcaactgaggctctgcagtggtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ctccaaagaatcaagggacaatcattccaagagtgtcaactgaggctctgcagtggtgaa 738
Query: 121 gtgcccaagtgtttgtcagggtagtgtgtttgggcaatgacttgaaaccacacaaatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gtgcccaagtgtttgtcagggtagtgtgtttgggcaatgacttgaaaccacacaaatagt 678
Query: 181 ctccaccaaattttgactttctagtttataagtaaatatttcttaccagaccaggaaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctccaccaaattttgactttctagtttataagtaaatatttcttaccagaccaggaaaac 618
Query: 241 tttaaagaatgtctctgaatgagagggaccacaagggcaaaatacacagcatctgatggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tttaaagaatgtctctgaatgagagggaccacaagggcaaaatacacagcatctgatggc 558
Query: 301 tacttttacctggataaatagaaaaccctgggtgaaagtctataagcctttgtcattaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tacttttacctggataaatagaaaaccctgggtgaaagtctataagcctttgtcattaac 498
Query: 361 tacactgaattctgacaatacgagggaagatatgggtttatagcctatgttctgtgagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tacactgaattctgacaatacgagggaagatatgggtttatagcctatgttctgtgagtg 438
Query: 421 tatgtaaaggcaatatcctaactctaagatagcagaggagaatcttaaaagcatagatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tatgtaaaggcaatatcctaactctaagatagcagaggagaatcttaaaagcatagatgc 378
Query: 481 agatcataattgagtttctttatttgaggctcagatttgctggctttaatctaatttaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agatcataattgagtttctttatttgaggctcagatttgctggctttaatctaatttaaa 318
Query: 541 atcctgagcagcagcccaaagtctgtgatatcatctaatttattaggtaagaaacagccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atcctgagcagcagcccaaagtctgtgatatcatctaatttattaggtaagaaacagccc 258
Query: 601 accatagtagctacacctctctgtcacctttgttcttaagttttctagggtctagag 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 accatagtagctacacctctctgtcacctttgttcttaagttttctagggtctagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
