Query= MSMg01no520_e12.b1 MSMg01no520_e12.b1 CHROMAT_FILE:
MSMg01no520_e12.b1 PHD_FILE: MSMg01no520_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:17 2005
(713 letters)
>mm_chr10_45732506_45733618
Length = 1113
Score = 1069 bits (553), Expect = 0.0
Identities = 592/609 (97%), Gaps = 7/609 (1%)
Strand = Plus / Minus
Query: 112 cgggtatgtggttagagccacatgattctcagaacaaacgcgttgaaaagtgatcaagcc 171
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1113 cgggtatgtggttagagccacatgattctcagaacaaacgcattgaaaagtgatcaagcc 1054
Query: 172 aaaataaagagcaaccaacttacatgttaggacagaattgttcctgtg-------tagtt 224
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1053 aaaataaagagcaaccaacttacatgttaggacagaattgttcctgtgtagttgatagtt 994
Query: 225 aggtttctggatttagtacatacaaatacaagaacccagttaggcatgaatttcagatga 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 aggtttctggatttagtacatacaaatacaagaacccagttaggcatgaatttcagatga 934
Query: 285 acagctacaactttttttaggtcagtacatcacggaggtcaaacaaatggggaaggaggg 344
|||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 933 acagctacaactttgattaggtcagtgcatcacggaggtcaaacaaatggggaaggaggg 874
Query: 345 aaaacccacatcctccacttcacagcagagtcagaatagaagcatcagtactatctatta 404
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 aaaacccacatcctgcacttcacagcagagtcagaatagaagcatcagtactatctatta 814
Query: 405 taggttcaataagtaccaaactgtcaaaaccacttgcctctggagatcagtaaatataag 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 taggttcaataagtaccaaactgtcaaaaccacttgcctctggagatcagtaaatataag 754
Query: 465 aattaggcaagggctgcactctctgtatacacaagattggattaaaatgtaagctaaatt 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 aattaggcaagggctgcactctctgtatacacaagattggattaaaatgtaagctaaatt 694
Query: 525 attcagtgactctggaacaaatgacagaaattgtggcaaatagaaatatttgtcaaagga 584
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 693 attcagtgactctggaacaaatgacagaaattgtggcaaatagaaatatttggcaaagga 634
Query: 585 ggaagcataggtggttgtgatataatgttgaaacttgactatgaaagagttagaagtagc 644
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 633 ggaagcataggtggttgtgatataatgttgaaacttaagtatgaaagagttagaagtagc 574
Query: 645 ccagcaaatgtcaacagatctttaaatgctgttaataatgttcccatgttgtgggggctg 704
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 573 ccagcaaatgtcaacagatctttaaatgctgttaataaagtccccatgttgtgggggctg 514
Query: 705 tgtggaatt 713
|||||||||
Sbjct: 513 tgtggaatt 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 713
Length of database: 1113
Length adjustment: 10
Effective length of query: 703
Effective length of database: 1103
Effective search space: 775409
Effective search space used: 775409
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no520_e12.g1 MSMg01no520_e12.g1 CHROMAT_FILE:
MSMg01no520_e12.g1 PHD_FILE: MSMg01no520_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:17 2005
(441 letters)
>mm_chr10_45592796_45593636
Length = 841
Score = 659 bits (341), Expect = 0.0
Identities = 386/413 (93%), Gaps = 19/413 (4%)
Strand = Plus / Plus
Query: 1 cttcttggtccatcatcatccacaccgacaggatggagtcgctataccttcagtgtgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcttggtccatcatcatccacaccgacaggatggagtcgctataccttcagtgtgctc 260
Query: 61 tttctttaccagttcatatccctctctggtttctctctgtaaccccacttatcacctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctttaccagttcatatccctctctggtttctctctgtaaccccacttatcacctttc 320
Query: 121 tagcactttctgttatttgagatgatcatctcatatctgtttgtattcgttacctttctt 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 tagcactttctgttatttgagatgatcatctcacatctgtttgtattcgttacctttctt 380
Query: 181 ctcactaggggttcaaccctgggagggtgaaacagtgaggacagggatactgtctctgtg 240
||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||
Sbjct: 381 ctcactaggggttcaaccctgggagggggaaacagtgagggcagggatactgcctctgtg 440
Query: 241 ttgtgtgaacaaatatgaacaaacatgaaatcaaaacagaattatggagatcggtttggg 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtgtgaacgaatatgaacaaacatgaaatcaaaacagaattatggagatcggtttggg 500
Query: 301 gccagtgaagcccaaagttattcctgtcccacctgtttcctgcattgctgaccagagttt 360
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccagtgaagcccaaagttattcctgtcccacctgtttcctgcattgct----------- 549
Query: 361 gtttgacttagatgattctctttatgtatgtatgtatgtatgtatgtatgtat 413
||||||||||||| |||| ||| ||||||||||||||||||||||
Sbjct: 550 --------tagatgattctctgtatgcatgcatgtatgtatgtatgtatgtat 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
