Query= MSMg01no520_j12.b1 MSMg01no520_j12.b1 CHROMAT_FILE:
MSMg01no520_j12.b1 PHD_FILE: MSMg01no520_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:41 2005
(629 letters)
>mm_chr10_24666993_24668021
Length = 1029
Score = 1154 bits (597), Expect = 0.0
Identities = 618/625 (98%)
Strand = Plus / Plus
Query: 5 gaattcagtaaaccatgtttacacgcacaaatcaacccattctacaggcatcttggacaa 64
|||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtaaaccatgttttcacgcacgcatcaacccattctacaggcatcttggacaa 264
Query: 65 ctgctgttcaatgacagtaaattgacagcctaaaacaggggctgcttccacaggatccag 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgctgttcaatgacagtaaattgccagcctaaaacaggggctgcttccacaggatccag 324
Query: 125 aaataggaagaggatgaaggttttgttcagttgcaagagtatcaagttctgccagctgag 184
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 aaatagggagaggatgaaggttttgttcagttacaagagtatcaagttctgccagctgag 384
Query: 185 tcttcacccatacgtagcaatctgcatgagtagaatattaatctcaggactctggtcatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcttcacccatacgtagcaatctgcatgagtagaatattaatctcaggactctggtcatg 444
Query: 245 attgctggattgagggctttatgatatagtgcaaggtcagaatttcaatgtgagacacgt 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 attgctggattgagggctttatgatatagtgcaaggtcagaatttgaatgtgagacacgt 504
Query: 305 aacttgtgagacagttacatataaaaagtggggagccacaataacctgattcttgtgaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacttgtgagacagttacatataaaaagtggggagccacaataacctgattcttgtgaag 564
Query: 365 gatatactggttaacatgtctaatccagtgcctgcctatgatagatgctcaatgaaacga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gatatactggttaacatgtctaatccagtgcctgcctatgatagatgctcaatgaaacga 624
Query: 425 tgactgttatattaaagttctctctctctctctcctctgtgtgcgtctctgtctctctct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgactgttatattaaagttctctctctctctctcctctgtgtgcgtctctgtctctctct 684
Query: 485 ctgtctctgtctctctctgtgtttgtgtctgtgtctgtgtatgtgtttgtgcttgttcgc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctgtctctgtctctctctgtgtttgtgtctgtgtctgtgtatgtgtttgtgcttgttcgc 744
Query: 545 aaggcaaggcaaggcagtggctccatgcagctattccagagagcaatgacttgcaaaaac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaggcaaggcaaggcagtggctccatgcagctattccagagagcaatgacttgcaaaaac 804
Query: 605 tgcttctcgtgtgaatctgaagcct 629
|||||||||||||||||||||||||
Sbjct: 805 tgcttctcgtgtgaatctgaagcct 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_j12.g1 MSMg01no520_j12.g1 CHROMAT_FILE:
MSMg01no520_j12.g1 PHD_FILE: MSMg01no520_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:41 2005
(602 letters)
>mm_chr10_24831408_24832409
Length = 1002
Score = 1110 bits (574), Expect = 0.0
Identities = 593/602 (98%), Gaps = 5/602 (0%)
Strand = Plus / Minus
Query: 1 aagagctcattcccagcaccattgtgtagataagattaaaaagtgatagtctataaatgt 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 966 aagagctcattcccagcaccgttgtgtagataagattaaaaagtgatagtctataaatgt 907
Query: 61 gatgttttaagggtatattgtactgttggttagaaaatgtccccgaaataacttgaccct 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 906 gatgttttaagggtatattgtactgttggttagaaaatgtccccgaaacaacttgaccct 847
Query: 121 cataagaaatttccagagattgctttttttttttttttttttaaaaaaaggtcatacttg 180
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 846 gataagaaatttccagagattgctttttttttttttttt-----aaaaaggtcatacttg 792
Query: 181 cagaagaaatttagaaacggggtctttgctctaagattagtacatgggggtggggggagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 cagaagaaatttagaaacggggtctttgctctaagattagtacatgggggtggggggagt 732
Query: 241 gatggcagtaggtatttgaccaggggctcagaaaccccagcggtgtttgcaattccattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gatggcagtaggtatttgaccaggggctcagaaaccccagcggtgtttgcaattccattc 672
Query: 301 agaggtcttatcttcaatcacaggctgcttagttctcatgagttgtatttgtaaagctcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 agaggtcttatcttcaatcacaggctgcttagttctcatgagttgtatttgtaaagctcg 612
Query: 361 tggctcatctactcagcaagatggatgataagattatttttgccttcttggctatgtgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tggctcatctactcagcaagatggatgataagattatttttgccttcttggctatgtgat 552
Query: 421 gctggactctgatccaatgaagtactctgctatggcaaaatgccttccctttgccaatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gctggactctgatccaatgaagtactctgctatggcaaaatgccttccctttgccaatgc 492
Query: 481 agaaggaaaaaaatatcctattaaatggcaagttataaaaatctcggaatggctcccagc 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agaaggaaaaaaaaatcctattaaatggcaagttataaaaatctcggaatggctcccagc 432
Query: 541 tgaaatactgtttgtattctcctagatagagtctccctttgaagtcattgctatttcaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgaaatactgtttgtattctcctagatagagtctccctttgaagtcattgctatttcaaa 372
Query: 601 gg 602
||
Sbjct: 371 gg 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
