Query= MSMg01no521_k17.b1 MSMg01no521_k17.b1 CHROMAT_FILE:
MSMg01no521_k17.b1 PHD_FILE: MSMg01no521_k17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:04 2005
(482 letters)
>mm_chr10_95008725_95009606
Length = 882
Score = 804 bits (416), Expect = 0.0
Identities = 428/435 (98%), Gaps = 5/435 (1%)
Strand = Plus / Plus
Query: 7 attctatccagtgtgacaganaatcctggtttttctctgtagtcctggctgccctggaat 66
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 212 attctatccagtgtgacagaaaatcctggtttttctctgtagtcctggctgccctggaat 271
Query: 67 ttctctatagcccaggctgaccttgaactgagatcttcctgcccctgctaactatgcctg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttctctatagcccaggctgaccttgaactgagatcttcctgcccctgctaactatgcctg 331
Query: 127 gcttcagacttggaaattgagaccaatagagaccaggctggctttgaacctgtgattgat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gcttcagacttggaaattgagaccaatagagaccaggctggctttgaacctgtgattgat 391
Query: 187 tagcatagcagtgctgctctccttgtctcccagagctgggattaaaggcatgtgttatta 246
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 392 tagcatagcagtgctgctctccttgtctcccagagct-----taaaggcatgtgttatta 446
Query: 247 ctacttacccagcccaaactactgcatttaatcactgctctgaaacttctagttctttta 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctacttacccagcccaaactactgcatttaatcactgctctgaaacttctagttctttta 506
Query: 307 catgtttgagtggaaattacagtaaggaatgtcctgttatttttctagttttggttatta 366
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 catgtttgagtggaaattatagtaaggaatgtcctgttatttttctagttttggttatta 566
Query: 367 acctattaggaaacttcatggcgttaagccaccaatccaagttagtcgaagtgcacaaga 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 acctattaggaaacttcatggcgttaagccaccaatccaagttagtcgaagtgcacaaga 626
Query: 427 gctgtgtgtgtgtgt 441
|||||||||||||||
Sbjct: 627 gctgtgtgtgtgtgt 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_k17.g1 MSMg01no521_k17.g1 CHROMAT_FILE:
MSMg01no521_k17.g1 PHD_FILE: MSMg01no521_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:04 2005
(598 letters)
>mm_chr10_95172662_95173659
Length = 998
Score = 1056 bits (546), Expect = 0.0
Identities = 589/620 (95%), Gaps = 26/620 (4%)
Strand = Plus / Minus
Query: 1 aatccagtgttgtcagctttcagagggatgaatatttcaagccatagctctaattgagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aatccagtgttgtcagctttcagagggatgaatatttcaagccatagctctaattgagct 652
Query: 61 cggagcccttttatggatatttcacagaagagctaaatacaaagaagaaaagaaaactgg 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 651 cggagcccttttatggatatttcacggaagagctaaatacaaagaagaaaagaaaactgg 592
Query: 121 cccaagtctacctcagcaggaaagcagcctgggtccagagtggctgcagtggctccttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cccaagtctacctcagcaggaaagcagcctgggtccagagtggctgcagtggctccttcc 532
Query: 181 aagtgaacactgacagctttccttcctcgcgtggtgtgcttacttctcttagtcccttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aagtgaacactgacagctttccttcctcgcgtggtgtgcttacttctcttagtcccttct 472
Query: 241 tcttctgccccagacctgggaaataatttctcataccctctgtcagccccaaaccatcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tcttctgccccagacctgggaaataatttctcataccctctgtcagccccaaaccatcca 412
Query: 301 tccccaccttacacctggtgtccccacagtggatgtccttctgcccaccaggttttgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tccccaccttacacctggtgtccccacagtggatgtccttctgcccaccaggttttgttt 352
Query: 361 aaagagacagcagaagctgctggggtcaaaagtgcccggagagttcttcaacaagtgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aaagagacagcagaagctgctggggtcaaaagtgcccggagagttcttcaacaagtgttt 292
Query: 421 gggaagctcaacccttgagagcagaaagttgatagcacctcaacatgtggagactcttgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gggaagctcaacccttgagagcagaaagttgatagcacctcaacatgtggagactcttgc 232
Query: 481 tcctcaccaccccacccctgctccccac--------------------------ccccgc 514
|||||||||||||||||||||||||||| ||||||
Sbjct: 231 tcctcaccaccccacccctgctccccaccccacccccactccccgctccccactccccgc 172
Query: 515 tccccgctccccactccaagagcttcaaaactccaaggcagcggaaaacgcatttgttat 574
||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 171 tccccactccccactccaagagcttcaaaactccaaggcagcagaaaacacatttgttat 112
Query: 575 aagtgtgttctgaaaacgaa 594
||||||| ||||||||||||
Sbjct: 111 aagtgtgctctgaaaacgaa 92
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
