Query= MSMg01no521_p23.b1 MSMg01no521_p23.b1 CHROMAT_FILE:
MSMg01no521_p23.b1 PHD_FILE: MSMg01no521_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:29 2005
(493 letters)
>mm_chr10_71885010_71885902
Length = 893
Score = 880 bits (455), Expect = 0.0
Identities = 479/487 (98%), Gaps = 2/487 (0%)
Strand = Plus / Minus
Query: 8 gaattctctccagtgtcctggaggggatattttaactctaaagacaccactgggtttttg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gaattctctccagtgtcctggaggggatattttaactctaaagacaccactgggtttttg 555
Query: 68 aaaagtcaaaagatttggtgggcactttcttgggcttgtagcactataacaacaacatag 127
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 554 aaaagtcaaaagatttggtgggcaccttcttgggcttgtagcactataacaacatcatag 495
Query: 128 gaagtgtggtttaaacaattgaaatttatcatggctcagaagttcaaattcaggatgcaa 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gaagtgtggtttaaacaattgaaatttatcatggctcagaagttcaaattcaggatgcaa 435
Query: 188 gctaattaagttctttatgaggactttcttcacggtttgtccaatggtttccttctttga 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gctaattaagttctttatgaggactttcttcacggtttgtccaatggtttccttctttga 375
Query: 248 ctttttgtgggggtgtatataagcattctggtgtgtcttatacagacatgaatctaatac 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctttttgtgggggtgtatataagcattctggtgtgtcttatacagacatgaatctaatac 315
Query: 308 attcccagtacatgactaaaggcctctaagctgtcctttgcaaatgcatcattataagga 367
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 314 attcccagtacacgactaaaggcctctaagctgtcctttgcaaatgcatcattacaagga 255
Query: 368 ggtcaggacttcaccatttgaactgtgtgaggaggcaaataaatattcaaaccttatatg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggtcaggacttcaccatttgaactgtgtgaggaggcaaataaatattcaaaccttatatg 195
Query: 428 cctcagtacaggggaacaccagggccaagaagtgggagtgaatgggtaggggagttggg- 486
||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||
Sbjct: 194 cctcagtacaggggaacaccagggccaagaagtaggagtggatgggtaggggagt-ggga 136
Query: 487 gggggga 493
|||||||
Sbjct: 135 gggggga 129
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_p23.g1 MSMg01no521_p23.g1 CHROMAT_FILE:
MSMg01no521_p23.g1 PHD_FILE: MSMg01no521_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:29 2005
(669 letters)
>mm_chr10_71740414_71741482
Length = 1069
Score = 1243 bits (643), Expect = 0.0
Identities = 663/670 (98%), Gaps = 2/670 (0%)
Strand = Plus / Plus
Query: 1 cctaagatgtacgctgaacctctcaatatatcagagatggatctgttttattgctaagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctaagatgtacgctgaacctctcaatatatcagagatggatctgttttattgctaagta 260
Query: 61 gagactgcactccataatgtgtaatgaatgttcaaatttgtgatcttaatttcttagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagactgcactccataatgtgtaatgaatgttcaaatttgtgatcttaatttcttagaaa 320
Query: 121 catctgacaacatagactaatgcagaactattttttgttattagaaggggatttggaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catctgacaacatagactaatgcagaactattttttgttattagaaggggatttggaata 380
Query: 181 tgctgtagtttaataaagtttggttttgctaatttttcaaattgtggtgtgttttttcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctgtagtttaataaagtttggttttgctaatttttcaaattgtggtgtgttttttcag 440
Query: 241 tgagtagtcagaggaacaggacttaaaatagcttagagttcattcgtttcaagatttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagtagtcagaggaacaggacttaaaatagcttagagttcattcgtttcaagatttcaa 500
Query: 301 aatcaggtcaagagagacagaaaggttttatgaagataaatatccttc-aancagagacg 359
||||||||||||||||||||||||||||||||||||||| |||||| | || |||||||
Sbjct: 501 aatcaggtcaagagagacagaaaggttttatgaagataagtatcct-cgaagcagagaca 559
Query: 360 actcaggcacttagttcttctcgtattatttacattctgcaactctaccatttcatctct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 actcaggcacttagttcttctcgtattatttacattctgcaactctaccatttcatctct 619
Query: 420 aaatcctcccaaagaaaaatctttgtttcataaatattaaaacattctaagatataaaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 620 aaatcctcccaaagaaaaatctttgtttcataaatattaaaacattctaaggtataaaat 679
Query: 480 acataatataaatcacatgagataccctaatattaacaataaaaacatcaattttgttac 539
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acataatataaatcatatgagataccctaatattaacaataaaaacatcaattttgttac 739
Query: 540 tttttatgcctttgacagatttttttgtttcttcattgtttttgcattgctggagtctga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tttttatgcctttgacagatttttttgtttcttcattgtttttgcattgctggagtctga 799
Query: 600 actcatgaacttatgcacaaaagaaaaaagcagtctaccgctgagctatatcttcacccc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 actcatgaacttatgcacaaaagaaaaaagcagtctaccgctgagctatatcttcacccc 859
Query: 660 taaatgtata 669
||||||||||
Sbjct: 860 taaatgtata 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
