Query= MSMg01no523_c08.b1 MSMg01no523_c08.b1 CHROMAT_FILE:
MSMg01no523_c08.b1 PHD_FILE: MSMg01no523_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:58 2005
(504 letters)
>mm_chr10_26492095_26492998
Length = 904
Score = 928 bits (480), Expect = 0.0
Identities = 498/504 (98%)
Strand = Plus / Minus
Query: 1 gtgtttccgatacagtcatttgatcagtcagtatttgcacatgcacctgctaagcaactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gtgtttccgatacagtcatttgatcagtcagtatttgcacatgcacctgctaagcaactg 645
Query: 61 gtcggagcgccacagagtcacctcccacacacccccgcccccgactccccccatcctcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gtcggagcgccacagagtcacctcccacacacccccgcccccgactccccccatcctcca 585
Query: 121 ctggtaaccagaagggctcttgcactcgagtaaatgagatgcaaagaactagccaaccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctggtaaccagaagggctcttgcactcgagtaaatgagatgcaaagaactagccaaccgc 525
Query: 181 ctatgttgcagcgtcaggtcaggcttcaagtacagaggtgattctctccgctcttgacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctatgttgcagcgtcaggtcaggcttcaagtacagaggtgattctctccgctcttgacaa 465
Query: 241 cttccctgtcactttgttccttgggcaggtaggggggttttgtttttcctccttacctgg 300
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 464 cttccctgtcactttgttccttgggcaggtagagggtttttgtttttcctccttacctgg 405
Query: 301 aggtggcttcgtcgcctccctttgcatggctgtccccagcgacctggtccttgccgctgg 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 404 aggtggcttcgtcgcctccctttacatggctgtccccagcgacctggtccttgccgctgg 345
Query: 361 ggtggtaagcagttagcacaactcccgaggaactcgatagccagttcatggtgagagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ggtggtaagcagttagcacaactcccgaggaactcgatagccagttcatggtgagagaag 285
Query: 421 gggcataatttctgggattctgacacagaggggaatgaagttcctgtctcgcctggttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 284 gggcataatttctgggattctgacacagaggggaatgaagttcctgtctcgcctgaccaa 225
Query: 481 cttgctcattagcaagggccagcc 504
||||||||||||||||||||||||
Sbjct: 224 cttgctcattagcaagggccagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_c08.g1 MSMg01no523_c08.g1 CHROMAT_FILE:
MSMg01no523_c08.g1 PHD_FILE: MSMg01no523_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:58 2005
(656 letters)
>mm_chr10_26349138_26350189
Length = 1052
Score = 1226 bits (634), Expect = 0.0
Identities = 649/656 (98%), Gaps = 4/656 (0%)
Strand = Plus / Plus
Query: 1 attcctaacaatcctgagggcctaagtattgcacagatgatccaggtagggaccaggcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcctaacaatcctgagggcctaagtattgcacagatgatccaggtagggaccaggcag 260
Query: 61 tataggtatccttggctcacagaagttcaaatgtagaacagtcagagtgctgttaatttc 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tataggtattcttggctcacagaagttcaaatgtagaacagtcagagtgctgttaatttc 320
Query: 121 atgcaacacctaacttaaaaccaaagccacccacacgtagctcctccttagttctaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgcaacacctaacttaaaaccaaagccacccacacgtagctcctccttagttctaaaca 380
Query: 181 aatgaatctaaaaacgatgtggttcttagagtaggatcccatagaaatcttaagtaggaa 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgaatctaaaaacgatgcggttcttagagtaggatcccatagaaatcttaagtaggaa 440
Query: 241 aaaaaaaaaatcacaataaacagcaaccatgcaggaattgagacagttggtgtccatttt 300
|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 aaaaaa----tcacaataaacagcaaccatgcaggaatcgagacagttggtgtccatttt 496
Query: 301 ttccctaattatattatgtaatgatcagaaagtcagaatggagtagtctcacaactccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttccctaattatattatgtaatgatcagaaagtcagaatggagtagtctcacaactccac 556
Query: 361 catttgtttatgctaataaatggccgtattaagcaaagcgaggcatctctaaacagattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 catttgtttatgctaataaatggccgtattaagcaaagcgaggcatctctaaacagattt 616
Query: 421 ccgtgtttgtcaaatatggaaactatttgcttataagtctgttgtatttggcttctgaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ccgtgtttgtcaaatatggaaactatttgcttataagtctgttgtatttggcttctgaac 676
Query: 481 acaaagattgtgtaatttttaagaaatattattctgcttgacttggcaataatcttgtct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 acaaagattgtgtaatttttaagaaatattattctgcttgacttggcaataatcttgtct 736
Query: 541 aatattttcaatctgttttgcaaacagcagacaaacccaaacatattccgatattgctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aatattttcaatctgttttgcaaacagcagacaaacccaaacatattccgatattgctat 796
Query: 601 ttggtttttaacggcccacgcagaattaaaatacttaggtttattgattacttaat 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ttggtttttaacggcccacgcagaattaaaatacttaggtttattgattacttaat 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1052
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1042
Effective search space: 673132
Effective search space used: 673132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
