Query= MSMg01no525_a14.b1 MSMg01no525_a14.b1 CHROMAT_FILE:
MSMg01no525_a14.b1 PHD_FILE: MSMg01no525_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:30 2005
(633 letters)
>mm_chr10_107370327_107371359
Length = 1033
Score = 1158 bits (599), Expect = 0.0
Identities = 620/627 (98%)
Strand = Plus / Plus
Query: 7 gaattcagttttgtcaacatttctctttcagggaaatcaagtccttactatactgctaag 66
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcagttttgggaacatttctctttcagggaaatcaagtccttactatactgctaag 266
Query: 67 atacaatggggtacaagaagaaatgcagaaaggagattgcccccaaagattgttttaaaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atacaatggggtacaagaagaaatgcagaaaggagattgcccccaaagattgttttaaaa 326
Query: 127 agcaatcatgaatgcctactgtaaactcctttatccagatagaatcccagtgctgactac 186
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 327 agcaatcatgaatgcctactctaaactcctttatccagatagaatcccagtgctaactac 386
Query: 187 atgactcacttgtagatacagtgctggccattcatgagttatgccctcctgacctcaccc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atgactcacttgtagatacagtgctggccattcatgagttatgccctcctgacctcaccc 446
Query: 247 aacactctctttcttcattctaatgttattttagtcatgtctcatagcaacattttgggc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aacactctctttcttcattctaatgttattttagtcatgtctcatagcaacattttgggc 506
Query: 307 aacaactggccacacatacagtgacaattctgtaagattgtatctgctaatagtgacgtc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aacaactggccacacatacagtgacaattctgtaagattgtatctgctaatagtgacgtc 566
Query: 367 atagccattccatttgtggaaacactgtgatgttcacataacaatgaatgcatttcttag 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atagccattccatttgtggaaacactgtgatgttcacataacaatgaatgcatttcttag 626
Query: 427 aatgcatgtaatttttaagaaatgtcttattgtgtttgtaccttgtagtagagataacaa 486
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 627 aatgcatgtaatttttaagaaatgtcttattgtgtttgtaccttgtaatagtgataacaa 686
Query: 487 aacccttttgtaatataattgtgaaagcatcaattaattccaactataatattttctaca 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aacccttttgtaatataattgtgaaagcatcaattaattccaactataatattttctaca 746
Query: 547 taaacctgaagacacagtcatttttaagtatcactagtatttctagaaaaccactagcta 606
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 taaacctgaagacacagtgatttttaagtatcactagtatttctagaaaaccactagcta 806
Query: 607 gacattaagttttgtacgtatcatttc 633
|||||||||||||||||||||||||||
Sbjct: 807 gacattaagttttgtacgtatcatttc 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_a14.g1 MSMg01no525_a14.g1 CHROMAT_FILE:
MSMg01no525_a14.g1 PHD_FILE: MSMg01no525_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:30 2005
(548 letters)
>mm_chr10_107595246_107596196
Length = 951
Score = 810 bits (419), Expect = 0.0
Identities = 439/447 (98%), Gaps = 3/447 (0%)
Strand = Plus / Minus
Query: 4 ttcttaatggtgcatctagctaaaattacttccta---cacatatctgcctgcccagtac 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 447 ttcttaatggtgcatctagctaaaattacttcctacaccacatatctgcctgcccagtac 388
Query: 61 cttggaaaactggcttcaactaccatttataacagtgatgattagagaaggttatagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cttggaaaactggcttcaactaccatttataacagtgatgattagagaaggttatagaaa 328
Query: 121 ggacttcatagcatgcatccctgcccatttcagagtactgaggcagccactggaagaaaa 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 327 ggacttcatagcatgcatccctgcccatttcagagtattgaggcagccactggaagaaaa 268
Query: 181 agttatctgaaagtacttatgtgctctgggagaaaagcttacacatttcacaaacaacgg 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 267 agttatctgaaagtacttatgtgctctgggagaaaagctaacacatttcacaaccaacgg 208
Query: 241 ttggttttgagacagggtttcactgtgtagctctctatcttggaactcactccgtagacc 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 207 ttggttttgagacagggtttcactgtgtagctctctatcttgggactcactccgtagacc 148
Query: 301 agtccggcctctaatccacagagatctacctgcctgtgcctcccaagtgctaggatgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 agtccggcctctaatccacagagatctacctgcctgtgcctcccaagtgctaggatgaag 88
Query: 361 gttgtgaccctctatgcctgacttgagccattctaactaaatcccaggaaaagcttctaa 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 87 gttgtgaccctctatgcctgacttgagctattctaactaaatcccaggaaaagcttctaa 28
Query: 421 attccccagggtaagatcaaaactgtg 447
|||||||||||||||||||||||||||
Sbjct: 27 attccccagggtaagatcaaaactgtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 951
Length adjustment: 10
Effective length of query: 538
Effective length of database: 941
Effective search space: 506258
Effective search space used: 506258
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
