Query= MSMg01no525_l01.b1 MSMg01no525_l01.b1 CHROMAT_FILE:
MSMg01no525_l01.b1 PHD_FILE: MSMg01no525_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:23 2005
(688 letters)
>mm_chr10_123640055_123641143
Length = 1089
Score = 1263 bits (653), Expect = 0.0
Identities = 677/685 (98%), Gaps = 1/685 (0%)
Strand = Plus / Plus
Query: 5 gaattccttctcctcactagctcacaagaagctaagcacactgagatgacaaggtcactt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttctcctcactagctcacaagaagctaagcacactgagatgacaaggtcactt 264
Query: 65 tctaaactctgcattcatcacagactatgtttttaacactcagcatttgtcaagagcagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctaaactctgcattcatcacagactatgtttttaacactcagcatttgtcaagagcagc 324
Query: 125 cagcgtcctctgaggaattattctgtctgtataccgactgagacagaaaagtgagtgttg 184
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagtgtcctctgaggaattattctgtctgtataccgactgagacagaaaagtgagtgttg 384
Query: 185 tagagtaatacacaagtcttccttgcggttaagaagtacatcagatgaatacatctcatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagagtaatacacaagtcttccttgcggttaagaagtacatcagatgaatacatctcatc 444
Query: 245 aacagaagtgcttttactgctctacaataaagaggccagatgtgtggactggttatgaag 304
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 445 aacagaagtgcttttactgctctacaataaagaggccagaagtgtggactggttatgaag 504
Query: 305 gggaggaatctagaggagatgtctgccttctcaaaggagagcatcc-ggctcctaacata 363
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 505 ggaaggaatctagaggagatgtctgccttctcaaaggagagcatcccggctcctaacata 564
Query: 364 aactcttgacttacctcagtgaatgtaaggtttctgctgtattctgatgactgtgacaaa 423
|||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 565 aactcttgacttgcctcagtgaatgtaaggtttctgctgtattctgatgactgcaacaaa 624
Query: 424 acccactaactctccaacaaaaacaacaaacaacagggaatatcctttaagcaacattac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 625 acccactaactctccaacaaaaacaacaaacaacagggaatatcctttaagcaacgttac 684
Query: 484 ttgcatagtctttattttgacaaaattatcaggtggacacaaaaatcacagtgctcatat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttgcatagtctttattttgacaaaattatcaggtggacacaaaaatcacagtgctcatat 744
Query: 544 agagaattggaagttatccgtggaaacatttttcgttaaagaggtcataagatgcttgtt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agagaattggaagttatccgtggaaacatttttcgttaaagaggtcataagatgcttgtt 804
Query: 604 tgatttgcctcagaaggctgagtttcagacaggctgaggccttaaatcttaagtagggat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tgatttgcctcagaaggctgagtttcagacaggctgaggccttaaatcttaagtagggat 864
Query: 664 acttgtttcacaagtcctatcacac 688
|||||||||||||||||||||||||
Sbjct: 865 acttgtttcacaagtcctatcacac 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1089
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1079
Effective search space: 731562
Effective search space used: 731562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_l01.g1 MSMg01no525_l01.g1 CHROMAT_FILE:
MSMg01no525_l01.g1 PHD_FILE: MSMg01no525_l01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:23 2005
(622 letters)
>mm_chr10_123768574_123769595
Length = 1022
Score = 791 bits (409), Expect = 0.0
Identities = 421/425 (99%)
Strand = Plus / Minus
Query: 198 tgtgtgtgtgtgttcctgactaatcttaagatccatttcctttagcattctattttcagt 257
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 822 tgtgtgtgtgtgttcctgactaatcttaagatccatttcctttagcattccattttcagt 763
Query: 258 acaagatcctaaaatttggttttcattttgtctagctgacaaatcttatttttatagact 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 acaagatcctaaaatttggttttcattttgtctagctgacaaatcttatttttatagact 703
Query: 318 cactttatttttaatctgtaaccaagttgacatagtgtaagtgataggtaaaagtaagaa 377
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 702 cactttatttttaatctgtaaccaagttgacatagtgtaagtgataggtaagagtaagaa 643
Query: 378 tgaaaatatcaaacgaagctttgtgtacataaactgaaatgcagcaagctcattcatcta 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tgaaaatatcaaacgaagctttgtgtacataaactgaaatgcagcaagctcattcatcta 583
Query: 438 aatctatcatgctaatatactgggactgtcttagaagtcagaatcagggtatacagttgg 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aatctatcatgctaatatactgggactgtcttagaagtcagaatcagggtatacagttgg 523
Query: 498 gctatttatgtttctcaactttctgaattcctgaattctattaatgttctaaagaattat 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gctatttatgtttctcaactttctgaattcctgaattctattaatgttctaaagaattat 463
Query: 558 aagataatatcctaatatgacatattaacgtttgttcttataataaattttccatggtaa 617
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 462 aagataatatcctaatatgatatattaacatttgttcttataataaattttccatggtaa 403
Query: 618 atagt 622
|||||
Sbjct: 402 atagt 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 100
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
