Query= MSMg01no525_l09.b1 MSMg01no525_l09.b1 CHROMAT_FILE:
MSMg01no525_l09.b1 PHD_FILE: MSMg01no525_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:25 2005
(366 letters)
>mm_chr10_89811207_89811976
Length = 770
Score = 520 bits (269), Expect = e-152
Identities = 298/309 (96%), Gaps = 4/309 (1%)
Strand = Plus / Plus
Query: 4 ggaattctgcatcattacaatgagttttaatcctattaatataacacacacatgcacaca 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgcatcattagaatgagttttaatcctattaatataacacacacatgcacaca 263
Query: 64 tgcatgcagacactaactcttatgggaatctttttattttattaaaaagaatgaacatag 123
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 264 tgcatgcagacactaactcttatgggaatctttttattttattaaaaagaacgaacatag 323
Query: 124 ataatgtatttaattttcatgc---tttaacacaaacattgttggacttcttccaatcct 180
||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 324 ataatgtttttaattttcatgcatctttaacacaaacattgttggacttcttccaatctt 383
Query: 181 tttttct-ctgctgttctcagaacattcaggactagattggaaacatagttcatggtagg 239
||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttttttttctgctgttttcagaacattcaggactagattggaaacatagttcatggtagg 443
Query: 240 gcacttgctaggtatgtttgaagcctgtgtttgatccctattagaaacagaggcagagag 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 444 gcacttgctaggtatgtttgaagcctgtgtttgatcccttttagaaacagaggcagagag 503
Query: 300 gtaggagga 308
|||||||||
Sbjct: 504 gtaggagga 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 770
Length adjustment: 9
Effective length of query: 357
Effective length of database: 761
Effective search space: 271677
Effective search space used: 271677
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_l09.g1 MSMg01no525_l09.g1 CHROMAT_FILE:
MSMg01no525_l09.g1 PHD_FILE: MSMg01no525_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:25 2005
(627 letters)
>mm_chr10_89942249_89943274
Length = 1026
Score = 1191 bits (616), Expect = 0.0
Identities = 625/628 (99%), Gaps = 2/628 (0%)
Strand = Plus / Minus
Query: 1 agactaagatcaaggacattaggcagtgactttgagctgtgtggagagattaaaaaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 agactaagatcaaggacattaggcagtgactttgagctgtgtggagagattaaaaaggtc 576
Query: 61 aacacacaagcagttataaatggcagaattaccgtacctttggactacagttcttatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aacacacaagcagttataaatggcagaattaccgtacctttggactacagttcttatttt 516
Query: 121 cctacatattttcaaagtctaggggaaggccacacatttaggaggtatagggagcaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cctacatattttcaaagtctaggggaaggccacacatttaggaggtatagggagcaacaa 456
Query: 181 gagtacacattgggctttagaaacaaccaaaaaggacgcaaagttatatggtgagagaag 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 455 gagtacacattgggctttagaaacaaccaaaaaggactcaaagttatatggtgagagaag 396
Query: 241 agaggctgggtctgggagaaggagttgggggagggggtgaacaggaccaaaatgtattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 agaggctgggtctgggagaaggagttgggggagggggtgaacaggaccaaaatgtattgt 336
Query: 301 tgaaaattctcaaaaaaaaaaaggtgggggaggggaggggaatgtataaagacttaattc 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgaaaattctc-aaaaaaaaaaggtgggggaggggaggggaatgtataaagacttaattc 277
Query: 361 tacaacaacagcaacagaaaggggtgggtgtaaagttattaaagaaataa-tttttttac 419
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 276 tacaacaacagcaacagaaaggggtgggtgtaaagttattaaagaaataattttttttac 217
Query: 420 atgttatataaagtgagactgatgaaatttcaactttgtcctgacttcattgtgttatat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atgttatataaagtgagactgatgaaatttcaactttgtcctgacttcattgtgttatat 157
Query: 480 gcaatactccatgatcatggattaactgaaaacttccagtcagtcctgtgatcaggtcaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gcaatactccatgatcatggattaactgaaaacttccagtcagtcctgtgatcaggtcaa 97
Query: 540 ttctcaatatgttacctcttaaacccccaaactcagcaggttaggcatatacagtttgtt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 ttctcaatatgttacctcttaaacccccaaactcagcaggttaggcatatacagtttgtt 37
Query: 600 gttcacttacataattttcaacttccta 627
||||||||||||||||||||||||||||
Sbjct: 36 gttcacttacataattttcaacttccta 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1026
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1016
Effective search space: 626872
Effective search space used: 626872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
