Query= MSMg01no526_k02.b1 MSMg01no526_k02.b1 CHROMAT_FILE:
MSMg01no526_k02.b1 PHD_FILE: MSMg01no526_k02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:36 2005
(561 letters)
>mm_chr10_128145118_128146078
Length = 961
Score = 957 bits (495), Expect = 0.0
Identities = 528/543 (97%), Gaps = 11/543 (2%)
Strand = Plus / Plus
Query: 16 gaattccaggacagtctggtctacaaagttagctcctcagtggctattcttgtagaatac 75
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 222 gaattccaggacagcctggtctacaaaattagctcctcagtggctattcttgtagaatac 281
Query: 76 ccatgtccaatccccagcacacacacatgcagctcacaactgtttgtaactccagaccta 135
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ccatgttcaatccccagcacacacacatgcagctcacaactgtttgtaactccagaccta 341
Query: 136 ggagatcaaacattctctgctgatctcgggggtcactaagtgtgtgctttggtgcacaga 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ggagatcaaacattctctgctgatctcgggggtcactaagtgtgtgctttggtgcacaga 401
Query: 196 catacatacatacagacaatagactctctctctctctctctcacacacacacacacaaac 255
||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 402 catacatacatacagacaatagactctctctctctct------cacacacacacacaaac 455
Query: 256 aataaaaaatattcttttctttttgtttgacagtatttctctgtgtaaaaggcatgcacc 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aataaaaaatattcttttctttttgtttgacagtatttctctgtgtaaaaggcatgcacc 515
Query: 316 accagcatccagcaataatgaatattcttttaaaaattatctgagcaggccctggtggtt 375
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 516 accagcatccagcaataatgaatattcttttaaaaattatctgagcaggccatggtggtt 575
Query: 376 tgcctttaatcccagcactcaggaagtagaagcaggtaaacctctgagttcaaggccagc 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tgcctttaatcccagcactcaggaagtagaagcaggtaaacctctgagttcaaggccagc 635
Query: 436 ctggtctacagagctccagaacagtgagggatacagagaaaccctgtccaaaaatatata 495
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 636 ctggtctacagagctccagaacagtgagggatacagagaaaccctgtccaaaaa-a-ata 693
Query: 496 tatatatatataaaacaaaaaaaaataagatgaatctgaaggatgggatggggatagagc 555
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 694 tatatatatataa--caaaaaaaa-taagatgaatctgaaggatgggatggggatagagc 750
Query: 556 tta 558
|||
Sbjct: 751 tta 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_k02.g1 MSMg01no526_k02.g1 CHROMAT_FILE:
MSMg01no526_k02.g1 PHD_FILE: MSMg01no526_k02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:37 2005
(611 letters)
>mm_chr10_128349605_128350615
Length = 1011
Score = 1098 bits (568), Expect = 0.0
Identities = 601/612 (98%), Gaps = 2/612 (0%)
Strand = Plus / Minus
Query: 1 ctagttggcgcctggcacaccattgtctagttttcctggggatagaagggaaagtgatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ctagttggcgcctggcacaccattgtctagttttcctggggatagaagggaaagtgatga 752
Query: 61 aaagtgatcatagccagattgggtggcttccgtgaaagaaggaaataaactcagggacat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 aaagtgatcatagccagattgggtggcttccgtgaaagaaggaaataaactcagggacac 692
Query: 121 tgccacacaggcggcaacattcttaaacattcttcttgagggttgagggaggaatttgct 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 691 tgccacacaggcggcaaaattcttaaacattcttcttgagggttgagggaggagtttgct 632
Query: 181 ggccctcaaagcatcagaaagccaaaaagttgtccaaaatagacatgtccaggctctact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ggccctcaaagcatcagaaagccaaaaagttgtccaaaatagacatgtccaggctctact 572
Query: 241 gcgtaggacctctgtggaaactccctttgacttatgcaagagatgacctcaaggatgctg 300
||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 571 gcgtaggacctctatggaaactccctttgacttatgcaggagatggcctcaaggatgctg 512
Query: 301 cggcaacactgtttgaaggctaagcaggcagcacataa-ccaggggcagaggagagtact 359
||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 511 cggcaacactgtttgaaggctaagcaggcagcaca-aagccaggggcagaggagagcact 453
Query: 360 cagctacaacctcctctggattccccacctcttccactgccagcccaaccaacaccctca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cagctacaacctcctctggattccccacctcttccactgccagcccaaccaacaccctca 393
Query: 420 agaaaatacacctttccccaaatgcccctaaatatgcctgcctattttcagggcaacgac 479
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 392 agaaaatacacctttccccaaatgcccctaaatatgcctgcctaatttcagggcagcgac 333
Query: 480 agggagaaggaaaaggaaggggccatccatcactctaagataaactgagaccatctcctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 agggagaaggaaaaggaaggggccatccatcactctaagataaactgagaccatctcctt 273
Query: 540 ttttaggtctgaaaaaataatccgtttaattgaaaaacctggagaatccactccatgaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttttaggtctgaaaaaataatccgtttaattgaaaaacctggagaatccactccatgaaa 213
Query: 600 agaccaaacgcc 611
||||||||||||
Sbjct: 212 agaccaaacgcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
