Query= MSMg01no526_k07.b1 MSMg01no526_k07.b1 CHROMAT_FILE:
MSMg01no526_k07.b1 PHD_FILE: MSMg01no526_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:38 2005
(617 letters)
>mm_chr10_54833713_54834730
Length = 1018
Score = 1152 bits (596), Expect = 0.0
Identities = 608/612 (99%), Gaps = 1/612 (0%)
Strand = Plus / Plus
Query: 7 gaattcaacattatgtcaataaataatttcaaggaaatggaaaataagtgctcagtagaa 66
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaacattatgccaataaataatttcaaggaaatggaaaataagtgctcagtagaa 266
Query: 67 ttaaaatatgaagaactttgactctagggatgttaacaaaaattcatcaatgttgctaga 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttaaaatatgaagaactttgactctagggatgttaacaaaaattcatcaatgttgctaga 326
Query: 127 atataaaaaaaacaagtaataaaataactcaattttagtgctatcatttcaagtttatta 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atataaaaaaaacaagtaataaaataactcaattttagtgctatcatttcaagtttatta 386
Query: 187 tactttgtggcaaatagcttgataagagtaaattttatgtaggaatacaaagaaaatgaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tactttgtggcaaatagcttgataagagtaaattttatgtaggaatacaaagaaaatgaa 446
Query: 247 ataaaatttgacaagcatttcagcaggggatgaaaagagagcaataagacagtcttaatt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ataaaatttgacaagcatttcagcaggggatgaaaagagagcaataagacagtcttaatt 506
Query: 307 aaattcaaaaaacgattgaaattgatgcaagtttctgagttgctaaagaaattatcactt 366
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaattcaaaaaacgattgaaattaatgcaagtttctgagttgctaaagaaattatcactt 566
Query: 367 ctgtgctggaagtgtagaagggaacaaagtaaagaatattcaagtagttaattatagttc 426
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ctgtgctgaaagtgtagaagggaacaaagtaaagaatattcaagtagttaattatagttc 626
Query: 427 attgggttaagtgttcattatttaaggaaaccttagtctaatcatttgtgctatagtgtt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 attgggttaagtgttcattatttaaggaaaccttagtctaatcatttgtgctatagtgtt 686
Query: 487 ttatttcatctttctgggatacaaagaaagttgaggtgatacaggtgaaagtgaacctgt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttatttcatctttctgggatacaaagaaagttgaggtgatacaggtgaaagtgaacctgt 746
Query: 547 gtgaattctctgcttttttgtaatcacagaaattagaaaccattttt-gtgccatttctt 605
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 747 gtgaattctctgcttttttgtaatcacagaaattagaaaccattttttgtgccatttctt 806
Query: 606 tagtcagtgaga 617
||||||||||||
Sbjct: 807 tagtcagtgaga 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1018
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1008
Effective search space: 611856
Effective search space used: 611856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_k07.g1 MSMg01no526_k07.g1 CHROMAT_FILE:
MSMg01no526_k07.g1 PHD_FILE: MSMg01no526_k07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:38 2005
(519 letters)
>mm_chr10_54936610_54937528
Length = 919
Score = 963 bits (498), Expect = 0.0
Identities = 512/520 (98%), Gaps = 8/520 (1%)
Strand = Plus / Minus
Query: 1 gaatggaatccttttgagacttttgagactgtcttccccagacaaatttaaaataataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gaatggaatccttttgagacttttgagactgtcttccccagacaaatttaaaataataaa 530
Query: 61 tgacagattagctcaatctgggtcaccctttgaggaacctgcagggtgaagtacagaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tgacagattagctcaatctgggtcaccctttgaggaacctgcagggtgaagtacagaaat 470
Query: 121 gagactagtttgatatgtttcaatccttatggtatctggttaactgcattttgttgcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gagactagtttgatatgtttcaatccttatggtatctggttaactgcattttgttgcaat 410
Query: 181 cccacagggtaatctgatgaagtgacataagaagttggtgaaaactctttattcatttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 cccacagggtaatctgatgaagtgacataagaagttggtgaaaactctttattcatttta 350
Query: 241 agacatggagaaatatgtgaatcttatttgttgggaatctgtagcctatactctgttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 agacatggagaaatatgtgaatcttatttgttgggaatctgtagcctatactctgttttc 290
Query: 301 ccacaaagtgcagatacaatctaaaagtgtctgattccaagtccaatatttaaagactat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ccacaaagtgcagatacaatctaaaagtgtctgattccaagtccaatatttaaagactat 230
Query: 361 tgtacaattagtgatttactgtggggatcagagagagagagagagagagagagagagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tgtacaattagtgatttactgtggggatcagagagagagagagagagagagagagagaga 170
Query: 421 gagagagagagagagagagagagagagaatgagaagagatttttttt-atagatcaagta 479
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 169 gagagagagagagagagagaga------atgagaagagatttttttttatagatcaagta 116
Query: 480 attgttccccagctcattttttgtgacataatagaaagga 519
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 115 attgttccccagctcattttt-gtgacataatagaaagga 77
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 100
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
