Query= MSMg01no526_m19.b1 MSMg01no526_m19.b1 CHROMAT_FILE:
MSMg01no526_m19.b1 PHD_FILE: MSMg01no526_m19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:50 2005
(505 letters)
>mm_chr10_123925421_123926324
Length = 904
Score = 271 bits (140), Expect = 9e-77
Identities = 152/156 (97%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 4 gaattctttaatac-tacacatatatttaatattaataattattatttatatgtatggct 62
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaattctttaatacacacacatatatttaatattaataattattatttatatgtatggct 350
Query: 63 gtgtacatatgtgaatttattgtggacccaagtacagatacttgctgagaccagaaaatg 122
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 349 gtgtacatatgtgaattta-tgtgggcccaagtacagatacttgctgagaccagaaaatg 291
Query: 123 gtatatatggttgtgttatgtgtacatatatcattc 158
||||||||||||||||||||||||||||||||||||
Sbjct: 290 gtatatatggttgtgttatgtgtacatatatcattc 255
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 904
Length adjustment: 10
Effective length of query: 495
Effective length of database: 894
Effective search space: 442530
Effective search space used: 442530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_m19.g1 MSMg01no526_m19.g1 CHROMAT_FILE:
MSMg01no526_m19.g1 PHD_FILE: MSMg01no526_m19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:50 2005
(640 letters)
>mm_chr10_123769437_123770476
Length = 1040
Score = 1237 bits (640), Expect = 0.0
Identities = 640/640 (100%)
Strand = Plus / Plus
Query: 1 catctgcagaggagggcgttcccaggtgtcttgagcaacatttttctgctctgttctgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catctgcagaggagggcgttcccaggtgtcttgagcaacatttttctgctctgttctgca 260
Query: 61 tgttcatttgattttctagtaagaagcttaaaatcaaaattggacagaacaaaatgccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttcatttgattttctagtaagaagcttaaaatcaaaattggacagaacaaaatgccat 320
Query: 121 ttctctgccaacattttggtgcagtaacagaggggagacataaggggcctaaaacacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctctgccaacattttggtgcagtaacagaggggagacataaggggcctaaaacacttt 380
Query: 181 gctgcttttcagctcaggaatggtgagaacaattcagaacagtcagttaaattctaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgcttttcagctcaggaatggtgagaacaattcagaacagtcagttaaattctaattt 440
Query: 241 tagattaacaatgattttccaaatcaggagccaggcatggcagctcaggtctgtgatctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagattaacaatgattttccaaatcaggagccaggcatggcagctcaggtctgtgatctc 500
Query: 301 tgaaatagagagtttgaaatttttggccatcctgggctgggtgggcattatagtgagtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaaatagagagtttgaaatttttggccatcctgggctgggtgggcattatagtgagtcc 560
Query: 361 caggctacattggattataaatgttagtccttacacacacacacacaattgattaacaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caggctacattggattataaatgttagtccttacacacacacacacaattgattaacaat 620
Query: 421 tcgagaaaatccatatcataactacatctatttaagtatgtcttgtattgtacaattcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcgagaaaatccatatcataactacatctatttaagtatgtcttgtattgtacaattcag 680
Query: 481 aacactacattatgcacaataaacacatgcatttctttttgctaagtctaaaaccaataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacactacattatgcacaataaacacatgcatttctttttgctaagtctaaaaccaataa 740
Query: 541 aatgtatatcaaccaccacttgtaatgcatgtatagtaaaataaatatttgttatttgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aatgtatatcaaccaccacttgtaatgcatgtatagtaaaataaatatttgttatttgcc 800
Query: 601 tgagattaaagcttaattggcagcctgattccttttatct 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgagattaaagcttaattggcagcctgattccttttatct 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
