Query= MSMg01no526_o01.b1 MSMg01no526_o01.b1 CHROMAT_FILE:
MSMg01no526_o01.b1 PHD_FILE: MSMg01no526_o01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:56 2005
(654 letters)
>mm_chr10_44084899_44085952
Length = 1054
Score = 1220 bits (631), Expect = 0.0
Identities = 646/651 (99%)
Strand = Plus / Plus
Query: 4 ggaattcagagcctaagctactacttacctatcattgtgctcctcgaaacttgcatgacc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagagcctaagctactacttacctatcattgtgctcctcgaaacttgcatgacc 263
Query: 64 ttgctccgaccatagagagcttgttggaaccgaagcctggtgataaggatgcacagggta 123
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 264 ttgctccgaccatagagagcttgttggaactgaagcctggtgataaggatgcacagggta 323
Query: 124 tgtccctgaggatgagggagaagtgtccccagccatgttgtgattttcccaatcagcgaa 183
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtccctgaggatgagggacaagtgtccccagccatgttgtgattttcccaatcagcgaa 383
Query: 184 actaagtgggttatcctaagacttcaggtttaacattgagcaattagctttggggtgggg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actaagtgggttatcctaagacttcaggtttaacattgagcaattagctttggggtgggg 443
Query: 244 gtgggggagccacagcaggagtgggggctggctctctccttccactcctggtcccagaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgggggagccacagcaggagtgggggctggctctctccttccactcctggtcccagaga 503
Query: 304 tagaactcagggtgtcactcttggcagcaagcacccttaaccacttagccacatcttgct 363
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 504 tagaactcagggtgtcactcttggcggcaagcacccttaaccacttagctacatcttgct 563
Query: 364 ggcccaccaataactcttaatggttatttttctatggtatacttgtttaaaaatctgttc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggcccaccaataactcttaatggttatttttctatggtatacttgtttaaaaatctgttc 623
Query: 424 agataacctatcttctagttttcaaaacatgcagtacatgtggctcgtgctagataatgc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agataacctatcttctagttttcaaaacatgcagtacatgtggctcgtgctagataatgc 683
Query: 484 aaattacattttctcagactgttgatgcttccgttctgagaggagtcgggtctcccatta 543
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 684 aaattacattttctcagactgttgatgcttccgttctgagaggagccgggtctcccatta 743
Query: 544 cctgtggcactgtaattcaaaaagcaggataaaatccctgggtatgaagggagaaaaatc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cctgtggcactgtaattcaaaaagcaggataaaatccctgggtatgaagggagaaaaatc 803
Query: 604 aaatatgatcatatttaaaactgggctcatttttatgcaaccacgatgaca 654
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaatatgatcatatttaaaactgggctcatttttatgcaaccacgatgaca 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_o01.g1 MSMg01no526_o01.g1 CHROMAT_FILE:
MSMg01no526_o01.g1 PHD_FILE: MSMg01no526_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:56 2005
(548 letters)
>mm_chr10_44120959_44121908
Length = 950
Score = 953 bits (493), Expect = 0.0
Identities = 536/551 (97%), Gaps = 5/551 (0%)
Strand = Plus / Minus
Query: 1 agtgcagcacgattgcgtgttggcatcgcagttaggagctaaataaagcacagcgtctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agtgcagcacgattgcgtgttggcatcgcagttaggagctaaataaagcacagcgtctct 680
Query: 61 gaaagaaatggctgtcgtcggttgatcagccctttgcagcagagttgggctccttctgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gaaagaaatggctgtcgtcggttgatcagccctttgcagcagagttgggctccttctgtc 620
Query: 121 cttcactgggccagcagcctaactgcggtaatcagaaacccccataaataccggtgagtt 180
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 619 cttcactgggccagcagcctaaccgaggtaatcagaaacccccataaataccggtgagtt 560
Query: 181 tgcacatagaaatgcatagccgcagcactggattttctaattacttacatgctttgtttc 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgcacatagaaatgcatagctgcagcactggattttctaattacttacatgctttgtttc 500
Query: 241 agaagagatcttg-aaaaaatgatctcgtttttggaagagaagcaaaacacacgaagata 299
||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 499 agaagagatcttgaaaaaaatgatctcatttttggaaaagaagcaaaacacacgaagata 440
Query: 300 tatcgccattgcaagtgagtggcatggtggcttctctgggctttgctttgtaatctgtga 359
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 439 tatcgccattgcaagtgagtggcatggtggcttccctgggctttgctttgtcatctgtga 380
Query: 360 aaggtgtgagtctcaaggggatgaattctaaagtgtctctgtctctatcaaatgcactgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaggtgtgagtctcaaggggatgaattctaaagtgtctctgtctctatcaaatgcactgt 320
Query: 420 cagattctgggattccaagccccaaacggacaaagcacacttctgcatgccctgcagtgt 479
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cagattctgggatcccaagccccaaacggacaaagcacacttctgcatgccctgcagtgt 260
Query: 480 cccaaatttaggtcaggtgcccccgagaggcatggagttgcctctaaaaa-tatatgctc 538
|||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 259 cccagatttaggtcaggtgcccccgagaggcatggaattgcctctaaaaaatatatgct- 201
Query: 539 tgtttc-accc 548
||||| ||||
Sbjct: 200 -gtttccaccc 191
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 950
Length adjustment: 10
Effective length of query: 538
Effective length of database: 940
Effective search space: 505720
Effective search space used: 505720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
