Query= MSMg01no527_c03.b1 MSMg01no527_c03.b1 CHROMAT_FILE:
MSMg01no527_c03.b1 PHD_FILE: MSMg01no527_c03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:16 2005
(576 letters)
>mm_chr10_35784596_35785577
Length = 982
Score = 565 bits (292), Expect = e-165
Identities = 413/474 (87%), Gaps = 44/474 (9%)
Strand = Plus / Minus
Query: 106 tattggtttagtatgtcaatctgttattgttttccatatatgaagtctaattgaaatgaa 165
||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||||
Sbjct: 982 tattggtttagtatgtcaatctgtttttgttttccatgtaagaagtataattgaaatgaa 923
Query: 166 acaatcagagtaattgtaacactaacctacaatttttaatgtatgcattgctatctattg 225
| ||||||||||||| |||||||| | ||||||||||||||||||||||||||||||
Sbjct: 922 ataatcagagtaattataacacta----agaatttttaatgtatgcattgctatctattg 867
Query: 226 atctatctacctatctatctatctctctctatctatctatctatctttctatctatctat 285
|| ||||||||||| |||||||||||||||||| ||||||
Sbjct: 866 at--------ctatctatcta------tctatctatctatctatc---------atctat 830
Query: 286 ttacctatcatctcttcatccacccatccatctatccttccacccatccacccatcca-t 344
||| | || | | |||||| | |||||||||||||||||||||||||||||| || |
Sbjct: 829 ttatc---ca-c-c--catccatctatccatctatccttccacccatccacccat-cagt 778
Query: 345 tcatgagattctgcaagtgttggatgaggtcatacagttctttatttttagtgtttgtag 404
||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 777 tcatgtgattctgcaagtgttggatgaggtcatacagtcctctatttttagtgtttgtag 718
Query: 405 tcacccag------attcaagaaaagcaggaactactatagttctgcttcaatgtagact 458
||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 717 acacccagactactattcaagaaaggcaggaactactatagttctgcttcaatgtagact 658
Query: 459 cttaaatgtataattcatgttttgctttatttttgaaaacattagtgttgtatttttata 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cttaaatgtataattcatgttttgctttatttttgaaaacattagtgttgtatttttata 598
Query: 519 agccatctaatatcctatggt-aaacacctattgttacaaacctgtaaggtttg 571
||| ||| |||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 597 agctatccaatatcctat-gtcaaacacctattgttacaaacctgtaaggtttg 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 982
Length adjustment: 10
Effective length of query: 566
Effective length of database: 972
Effective search space: 550152
Effective search space used: 550152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_c03.g1 MSMg01no527_c03.g1 CHROMAT_FILE:
MSMg01no527_c03.g1 PHD_FILE: MSMg01no527_c03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:16 2005
(391 letters)
>mm_chr10_35618356_35619146
Length = 791
Score = 733 bits (379), Expect = 0.0
Identities = 388/391 (99%)
Strand = Plus / Plus
Query: 1 aaagccaatgaggtaggagtgggtgggctggtgggtaggggaataccctcatagaagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagccaatgaggtaggagtgggtgggctggtgggtaggggaataccctcatagaagcag 260
Query: 61 gggaggatggggtaggtggctttgggggtgactgggaaaggggataacatttgaaatata 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggaggatgggataggtggctttgggggtgactgggaaaggggataacatttgaaatata 320
Query: 121 taaaaaaatccaataaaatttttaaaaattataatcaattaaaaattccatttatacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaaaaatccaataaaatttttaaaaattataatcaattaaaaattccatttatacttt 380
Query: 181 cctttatttctatccagcacatttggcactttacgtagtaaaaactagaaaaacttttct 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 cctttatttctatccagcacatttggcactttacatagtaaaaactagaaaaacttttct 440
Query: 241 actataaaaagtgttattttcctttacaaaactttaaaatatctgcagaaaactaaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actataaaaagtgttattttcctttacaaaactttaaaatatctgcagaaaactaaaatg 500
Query: 301 aaatcttttttttttttctgctctaatagtttccaagaaaataccatgggctccagacta 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 aaatcttttttttttttctgctctaatagtttccaagaaaataccatgggctccagacaa 560
Query: 361 agataacaacatgtacatgaaattgttaaag 391
|||||||||||||||||||||||||||||||
Sbjct: 561 agataacaacatgtacatgaaattgttaaag 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
