Query= MSMg01no528_g17.b1 MSMg01no528_g17.b1 CHROMAT_FILE:
MSMg01no528_g17.b1 PHD_FILE: MSMg01no528_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:00 2005
(699 letters)
>mm_chr10_30288822_30289920
Length = 1099
Score = 534 bits (276), Expect = e-155
Identities = 375/452 (82%), Gaps = 68/452 (15%)
Strand = Plus / Minus
Query: 248 cactgactagtgggacactgactagtgggccaccagagattttgttttcaagcttttaga 307
|||||||||||||| |||||||||||||| |||||||||||||||||||| | |||||||
Sbjct: 1017 cactgactagtggggcactgactagtggggcaccagagattttgttttcagggttttaga 958
Query: 308 gtaggctgagatcttccttttgtataaacacctttctttctttctttctttctttctttc 367
||||||||||||||||||||||||||||||||
Sbjct: 957 gtaggctgagatcttccttttgtataaacacc---------------------------- 926
Query: 368 tttctttctttctttctttctttctttctttctttctttctttctttctttctttctttt 427
||| ||||||| |||||||||
Sbjct: 925 -------------------------------------ttc---ctttcttcctttctttt 906
Query: 428 ttcttttagacagttagcagctgcttataattacattatgacctcactctgctttctgtc 487
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 905 ttcttttagacagttagcagctgcttataattacattatgacctcactctcctttctgtc 846
Query: 488 ttggcagatattttctcattttaatcacatttgaattgagtggtgaggaagcactactat 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 ttggcagatattttctcattttaatcacatttgaattgagtggtgaggaagcactactat 786
Query: 548 taaagtttagcatgaatataccacacctgtctcagtgtgaccttttagtaactggatgca 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 taaagtttagcatgaatataccacacctgtctcagtgtgaccttttagtaactggatgca 726
Query: 608 cagttttacttaatttgcttagtagcagaatttgctcttattttagccaattggtatgct 667
||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 725 cagctttacttaatttgcttagtagcagaatttgctcctattttagccatttggtatgct 666
Query: 668 aataaacgttctgttataacaaaatatgcaaa 699
||||||||||||||||||||||||||||||||
Sbjct: 665 aataaacgttctgttataacaaaatatgcaaa 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 11
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space: 750321
Effective search space used: 750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_g17.g1 MSMg01no528_g17.g1 CHROMAT_FILE:
MSMg01no528_g17.g1 PHD_FILE: MSMg01no528_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:01 2005
(644 letters)
>mm_chr10_30125519_30126565
Length = 1047
Score = 1220 bits (631), Expect = 0.0
Identities = 642/647 (99%), Gaps = 3/647 (0%)
Strand = Plus / Plus
Query: 1 attaagaacctatttggactttagtctgtggaaatgataataaccccgtggaattcccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaagaacctatttggactttagtctgtggaaatgataataaccccgtggaattcccaa 260
Query: 61 caggaaacagctatagacatgaaaagaaaacaccaccactgtgtttaaagccgaggaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggaaacagctatagacatgaaaagaaaacaccaccactgtgtttaaagccgaggaacc 320
Query: 121 caaaaaacactgggcagagccttacaaagcagaacaatagcccaaggaagacgaaaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaaaacactgggcagagccttacaaagcagaacaatagcccaaggaagacgaaaactg 380
Query: 181 tgggagcgccagaccgtgaaatggagagacaatggacgctggagtggggctggacactca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggagcgccagaccgtgaaatggagagacaatggacgctggagtggggctggacactca 440
Query: 241 aagggagctattaattcaagcaagatcaaaacagaaatcaatctatccgtgtgacttcca 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 aagggagctattaattcaagcaagatcaaaacagaaatcaatctagccgtgtgacttcca 500
Query: 301 gaagatcattaaagactaattactttctgtctacctcaatcgctttattgctgtgactgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagatcattaaagactaattactttctgtctacctcaatcgctttattgctgtgactgg 560
Query: 361 tacgctgtcctttctctgtctagatcctggagagaggaggaaaatgttttgcagctcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacgctgtcctttctctgtctagatcctggagagaggaggaaaatgttttgcagctcaga 620
Query: 421 tcatggcaagctgcatgaccccaccctagcgcctagatactaattcccaagagcttctaa 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 tcatggcaagctgcatgaccccaccctagcgcctagatactaattcccgagagcttctaa 680
Query: 481 acactcctacagacttaccagcatacagcttatgtgtgtgactaaggacaactaattaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acactcctacagacttaccagcatacagcttatgtgtgtgactaaggacaactaattaca 740
Query: 541 taaagtaatag---gagttattccactttcaaaaatgaaagataaaaatcaaggtttatg 597
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taaagtaatagcaggagttattccactttcaaaaatgaaagataaaaatcaaggtttatg 800
Query: 598 agaaacgtgctggaatttcttaaacttttaaatttaattgaattgga 644
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agaaacgtgctggaatttcttaaacttttaaatttaattgaattgga 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1047
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1037
Effective search space: 657458
Effective search space used: 657458
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
