Query= MSMg01no528_m05.b1 MSMg01no528_m05.b1 CHROMAT_FILE:
MSMg01no528_m05.b1 PHD_FILE: MSMg01no528_m05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:27 2005
(680 letters)
>mm_chr10_116160982_116162061
Length = 1080
Score = 630 bits (326), Expect = 0.0
Identities = 347/360 (96%), Gaps = 10/360 (2%)
Strand = Plus / Minus
Query: 1 aaaccattccagagtggaaggatgtatgtttctaattcttttggttcaggaataggaaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 360 aaaccattccagagtggaaggatgtatgtttctaattcttttggttcaggaataagaaca 301
Query: 61 tccatccttgtgaagtcagaaagccagaaaagagcagaacaatgccttaaagcttgtcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tccatccttgtgaagtcagaaagccagaaaagagcagaacaatgccttaaagcttgtcac 241
Query: 121 tgaaagttgctttctc----------aaaaaaaaaaagaaagaaagagaattattttcag 170
|||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 240 tgaaagttgctttctcaaaaaaaaaaaaaaaaaaaaagaaagaaagagaattattttcag 181
Query: 171 aggattgtacgtgatagcagccacttataatccagcactcagagtttaaagatgggactc 230
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agaattgtacgtgatagcagccacttataatccagcactcagagtttaaagatgggactc 121
Query: 231 tcaagtttgaagttggcctgagctacacggtaagacctgctcagaaagaaagagaaagca 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tcaagtttgaagttggcctgagctacacggtaagacctgctcagaaagaaagagaaagca 61
Query: 291 agataaggatggacgtagtgaaaagtttggtttcttaaaaacccagttatattatgtgag 350
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 agataaggatagacgtagtgaaaagtttggtttcttaaaaacccagttatattatgtgag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space: 716900
Effective search space used: 716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_m05.g1 MSMg01no528_m05.g1 CHROMAT_FILE:
MSMg01no528_m05.g1 PHD_FILE: MSMg01no528_m05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:27 2005
(643 letters)
>mm_chr10_116004764_116005805
Length = 1042
Score = 1220 bits (631), Expect = 0.0
Identities = 640/643 (99%), Gaps = 1/643 (0%)
Strand = Plus / Plus
Query: 1 aactaactttgtagacaactaactagaaagaggagatgtaagattattttactcatagag 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 aactaactttgtagacaactaactataaagaggagatgtaagattattttactcatagag 260
Query: 61 aagccaaggtctttacagaggcttacaggtctttcacctgctagtccccagttttcccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagccaaggtctttacagaggcttacaggtctttcacctgctagtccccagttttcccag 320
Query: 121 tactatctaatcggtctcttcctctcttactacacttcaataagtcttgtgattcttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactatctaatcggtctcttcctctcttactacacttcaataagtcttgtgattcttttt 380
Query: 181 tttttttaatcgtaagacatctagactactcctgtggtacggttatctgttcttcgttgc 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttt-aatcgtaagacatctagactactcctgtggtacggttatctgttcttcgttgc 439
Query: 241 tgtcccttcctaaaaggtctttcacttggataaatacaaaaccactccttcaccacaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtcccttcctaaaaggtctttcacttggataaatacaaaaccactccttcaccacaggc 499
Query: 301 ttccccattcaccctctgagaggaaaactggcctgttagccatacatcctccatagacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttccccattcaccctctgagaggaaaactggcctgttagccatacatcctccatagacct 559
Query: 361 ttgatttcttttgcttcataacttgaccaccaaccaccacagtctatgctgtgcaccctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgatttcttttgcttcataacttgaccaccaaccaccacagtctatgctgtgcaccctt 619
Query: 421 atattctattagaacagtatctgacaaagaaaaggagttaaaataatatttatcaaatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atattctattagaacagtatctgacaaagaaaaggagttaaaataatatttatcaaatga 679
Query: 481 attaataaactagtaacacagagttaagtcacttggccttgacctaaccctacaaagcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 attaataaactagtaacacagagttaagtcacttggccttgacctaaccctacaaagcaa 739
Query: 541 gtcactcattccaaatacaagcaggtatcaaactggctttaaagccctccaaaaacccta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtcactcattccaaatacaagcaggtatcaaactggctttaaagccctccaaaaacccta 799
Query: 601 agcttaataataaaagctggattctgattttagcatctactgt 643
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 800 agcttaataataaaaactggattctgattttagcatctactgt 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1042
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1032
Effective search space: 653256
Effective search space used: 653256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
