Query= MSMg01no529_f16.b1 MSMg01no529_f16.b1 CHROMAT_FILE:
MSMg01no529_f16.b1 PHD_FILE: MSMg01no529_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:17 2005
(642 letters)
>mm_chr10_112815808_112816849
Length = 1042
Score = 1149 bits (594), Expect = 0.0
Identities = 627/638 (98%)
Strand = Plus / Plus
Query: 5 gaattctgaaacctttgcagagcagcgcccccgagagctagtctcccaggttatagacaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgaaacctttgcagagcagcgcccccgagagctagtctcccaggttatagacaa 264
Query: 65 agtagaagagggttgatcatgatagcttaataacaggaacaaaggatggcccggggtaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 agtagaagagggttgatcatgatagcttaataacaggaacaaaggatggccgggggtaaa 324
Query: 125 tatggaatgaactgaaccattttcttaaatgcatgtacttttgagactaaaaaggaatag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatggaatgaactgaaccattttcttaaatgcatgtacttttgagactaaaaaggaatag 384
Query: 185 gtataatatctcatgttgtctttatgcatctagattcctgttgaagtaaatgaaatgagg 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtataatacctcatgttgtctttatgcatctagattcctgttgaagtaaatgaaatgagg 444
Query: 245 tcagagttgttaagtaattttagaatagttaaaaagtccattccaataaaagaaaatata 304
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 445 tcagagttgttaggtaattttagaatagttaaaaagtccatgccaataaaagaaaacata 504
Query: 305 taaaacaaaatgtgtttctaaaaggtgtgttagttagggtttccattgttttgaaaagac 364
||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 505 taaaagaaaatgtgtttctaaaaggtgtcttagttagggtttccattgttttgaagagac 564
Query: 365 accatgctgaggtaattcttataaaggacaacatttaattggagctggcttacaggttct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 accatgctgaggtaattcttataaaggacaacatttaattggagctggcttacaggttct 624
Query: 425 gaggttcagtccattgtgatgggaggtatggcagtgtcctggtaggtttggcactggagg 484
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 625 gaggttcagtccattgtgatgggaggcatggcagtgtcctggtaggtttggcactggagg 684
Query: 485 agctcagagttttgtatcttattccaaagtcaaaaaggagaagactgactcttctacatt 544
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 685 agctcagagttttgtatcttattccaaagtcaaacaggagaagactgactcttctacact 744
Query: 545 ggacagagataaatagaccaccccaacagctacacattttctccaacaagaccagacctc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggacagagataaatagaccaccccaacagctacacattttctccaacaagaccagacctc 804
Query: 605 atgacagtaccgctccctatgagtcagacatattcaaa 642
||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atgacagtaccgctccctatgagtcagacatattcaaa 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_f16.g1 MSMg01no529_f16.g1 CHROMAT_FILE:
MSMg01no529_f16.g1 PHD_FILE: MSMg01no529_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:17 2005
(668 letters)
>mm_chr10_112947567_112948636
Length = 1070
Score = 1201 bits (621), Expect = 0.0
Identities = 656/669 (98%), Gaps = 4/669 (0%)
Strand = Plus / Minus
Query: 1 atagccactatgcctcaagatctccataccaagatccatgccagaaacttctatctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1021 atagccactatgcctcaagatctccataccaagatccatgccagaaacttctatctccca 962
Query: 61 gcctctaaactaggaccactggtgagccttccaattctggattgtagttcattccagata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gcctctaaactaggaccactggtgagccttccaattctggattgtagttcattccagata 902
Query: 121 tagtcaagttgaccatcaggaatagctactacaaccatactgttgaaattaaattaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tagtcaagttgaccatcaggaatagctactacaaccatactgttgaaattaaattaatca 842
Query: 181 ttttcattaatatgctaattactaataatttattagaaaggaagacaaaatttatgaatt 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tttccattaatatgctaattactaataatttattagaaaggaagacaaaatttatgaatt 782
Query: 241 ctagagcatgcaattacttgaaaagagacttaccagaatatctgtgctgatcacgatcat 300
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 781 ctagagcatgcaattacttgaaaagagacttaccagaatatctgtgttaatcacgatcat 722
Query: 301 accgcatgcctctattcgtcaccaccatcccttgagaataataaacttaattggaagtgg 360
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 721 accgcatgcctctattcatcaccaccatcccttgagaataataaacttaaatggaagtgg 662
Query: 361 agatttatagtggagaggacactttcaatagaccaacgttgcagccccacaatacagaag 420
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 661 agatttatagtggagaggacactttcaatagaccaacgctgcagctccacaatacagaag 602
Query: 421 agctatctaagttcctagttgcttaagaactgaagtttttaagcagagaattatgtgcca 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 601 agctatctaagttcctagttgcttaagaactgaagttttaaagcagagaattatgtgcca 542
Query: 481 tgcatgttttcttaactcttctgagggaaatttcaagatatgatccccattaacactgca 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 541 tgcatgttttcttaactcttctgagggaaatttcaagata-gatccccattaacactgca 483
Query: 541 aagcataaacattgagataaaacaaaatcaaaaccaaaatagaaaatacacaaaacatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aagcataaacattgagataaaacaaaatcaaaaccaaaatagaaaatacacaaaacatca 423
Query: 601 aaaaactaaaccatatatactttaagtgc---actataaagtagaattatatgatgtttt 657
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 422 aaaaactaaaccatatatactttaagtgcactactataaagtagaattatatgatgtttt 363
Query: 658 tgtggatca 666
|||||||||
Sbjct: 362 tgtggatca 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1070
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1060
Effective search space: 697480
Effective search space used: 697480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
