Query= MSMg01no529_m11.b1 MSMg01no529_m11.b1 CHROMAT_FILE:
MSMg01no529_m11.b1 PHD_FILE: MSMg01no529_m11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:52 2005
(675 letters)
>mm_chr10_67896027_67897099
Length = 1073
Score = 1205 bits (623), Expect = 0.0
Identities = 659/671 (98%), Gaps = 2/671 (0%)
Strand = Plus / Minus
Query: 5 gaattcatgtttctgcacattatatcaaagcgagttctctattgtgattccaagccaata 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 gaattcatgtttcagtacattatatcaaagcgagttctctattgtgattccaagccaata 814
Query: 65 tccacttccctaataaagaaccccctgaaatggagagtaagcccttaattgttatgttta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tccacttccctaataaagaaccccctgaaatggagagtaagcccttaattgttatgttta 754
Query: 125 cccacttatttttttcccacagttcactcctctgttttagagatttattaagaatgaagt 184
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 753 cccactta-ttttttcccacagttcactcctccgttttagagatttattaagaatgaagt 695
Query: 185 tctcttggccctcagatgtcaatgaaaattacacagaatagaccaaacattttaagccaa 244
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tctcttggccctcagttgtcaatgaaaattacacagaatagaccaaacattttaagccaa 635
Query: 245 tatactctatatactttcattttaaagatacagttgaaatgaaattagcttggctccaaa 304
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tatactctatatattttcattttaaagatacagttgaaatgaaattagcttggctccaaa 575
Query: 305 ctgcataataaaaaaaaataagacccaatggaagcaactttaatatatttaaagaatcat 364
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ctgcataat-aaaaaaaataagacccaatggaagcaactttaatatatttaaagaatcat 516
Query: 365 attttagaaaattaggaatgagaatgctgaactcctgcatcaaagattggctgttggccc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 attttagaaaattaggaatgagaatgctgaactcctgcatcaaagattggctgttggccc 456
Query: 425 tgacacagccaacgaataagataatgtggggaaataatgtggccataacttgccaccctg 484
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tgacacagccaacgaataaaataatgtggggaaataatgtggccataacttgccaccctg 396
Query: 485 cggtttatgatgtcttacgttatactaccttacattgtgttatgaaagttacatatgttg 544
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 395 cggtttatgatgtcttacgttacactaccttacattgtgttatgaaagttacatatgttg 336
Query: 545 ttgcatgggtaacataatgacagctttggattgttcatgttagagaagtcatctgaggtt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 335 ttgcatgggtaacataatgacagctttggattgttcatgttagagaagtcatccaaggtt 276
Query: 605 gtgatcagtgaaagctactgatcacaggtcaggggattcagaacacttcctgaaagagag 664
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtgatcagtgaaagctactgatcacaggtcaggggattcagaacacttcctgaaagagat 216
Query: 665 agcagaagacc 675
|||||||||||
Sbjct: 215 agcagaagacc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1073
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1063
Effective search space: 706895
Effective search space used: 706895
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_m11.g1 MSMg01no529_m11.g1 CHROMAT_FILE:
MSMg01no529_m11.g1 PHD_FILE: MSMg01no529_m11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:52 2005
(496 letters)
>mm_chr10_67724750_67725645
Length = 896
Score = 959 bits (496), Expect = 0.0
Identities = 496/496 (100%)
Strand = Plus / Plus
Query: 1 tagtaacctgatacacactgtgggattagcccaaagcaaaaggacctaatgtcccagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagtaacctgatacacactgtgggattagcccaaagcaaaaggacctaatgtcccagctg 260
Query: 61 gcaggcagtctctatttagaacagtggttctcaaccttcctaaggcagacaccctttagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaggcagtctctatttagaacagtggttctcaaccttcctaaggcagacaccctttagt 320
Query: 121 acagttccccatgtcatggtgaccttcaaccgcacaatgtctctcattgctacttcttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagttccccatgtcatggtgaccttcaaccgcacaatgtctctcattgctacttcttaa 380
Query: 181 ctgtaattctgcttctgttatgaattgtaatgtaaatatctgtgtttccctgatggtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtaattctgcttctgttatgaattgtaatgtaaatatctgtgtttccctgatggtctt 440
Query: 241 gggcgatccctgagaaagggtcatgtgacctccaaaggggtcaagactcccaggctgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggcgatccctgagaaagggtcatgtgacctccaaaggggtcaagactcccaggctgaga 500
Query: 301 tctgctgttttggagactccttcccctaaggtgcacccaggacattctggctggcataca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgctgttttggagactccttcccctaaggtgcacccaggacattctggctggcataca 560
Query: 361 tccttacccttagttttcatctttggaatggttggacaggggtacagccttttttaccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccttacccttagttttcatctttggaatggttggacaggggtacagccttttttaccca 620
Query: 421 ttactaccaaaaaaagagatggaggaagaggagaaggaagagaagaataagaaagaagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttactaccaaaaaaagagatggaggaagaggagaaggaagagaagaataagaaagaagag 680
Query: 481 gaagaaagaagagagg 496
||||||||||||||||
Sbjct: 681 gaagaaagaagagagg 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
