Query= MSMg01no530_d06.b1 MSMg01no530_d06.b1 CHROMAT_FILE:
MSMg01no530_d06.b1 PHD_FILE: MSMg01no530_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:26 2005
(701 letters)
>mm_chr10_20703414_20704516
Length = 1103
Score = 1239 bits (641), Expect = 0.0
Identities = 684/699 (97%), Gaps = 2/699 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtttccttattttcctaaaatggtgaggg--aaaaaaaaaggtcaaattgctg 62
|||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||
Sbjct: 718 gaattcagtttccttaatttcctaaaatggtgaaggaaaaaaaaaaaggtcaaattgctg 659
Query: 63 cctctgacatgttcagtgttatatgttacaccatttatagaggacaaattcattttaaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 cctctgacatgttcagtgttatatgttacaccatttatagaggacaaattcattttaaaa 599
Query: 123 tgtcgcttctcgttgagagcagagcctgacctacacagtaccggcacttgggaagtggaa 182
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 598 tgtcgcttctcgttgagagcagagcctgacctacacagtactggcacttgggaagtggaa 539
Query: 183 gcaaaatcgccatgagtttgaggcagacagtaagtttcaggttaccatgggcaacaatat 242
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gcaggatcgccatgagtttgaggcagacagtaagtttcaggttaccatgggcaacaatat 479
Query: 243 accagcatttctcaacaaaataaaataaaatttagaatgacacaaaactttcaattctac 302
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 478 accagcatttctcaacaaaataaaataaaatttagaatgatacaaaactttcaattctac 419
Query: 303 tacactgaatattttaacattagcaagaagaatttttagcaacttcaatttagatttaaa 362
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tacacagaatattttaacattagcaagaagaatttttagcaacttcaatttagatttaaa 359
Query: 363 aaataaaaatggcaaattgcatttttgtgttatttagtgttgtatctaattattgtgtgt 422
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 358 aaataaaaatggcaaattgcatttttgtgttatttagtgttgtatttaattattgtgtgt 299
Query: 423 tttgtgtattattcacgttctcaaattatagcaattcttaaaaagaagtacttcacatac 482
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tttgtgtattattcacgttcttaaattatagcaattcttaaaaagaagtacttcacatac 239
Query: 483 attttctcacattgccctgtctgtttatatcatgatataaaaactttaatattttataaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 attttctcacattgccctgtctgtttatatcatgatataaaaactttaatattttataaa 179
Query: 543 ttaaaaactgactcaacaaggtttagtcagagttgactcattcctcatagacttcctttg 602
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 178 ttcaaaactgactcaacaaggtttagtcagagttgactctttcctcatagacttcctttg 119
Query: 603 ccctgagaatgtatgctccaggcataacatctgcattatactacttagattataatcatt 662
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 118 ccttgagaatgtatgctccaggcataacatatgcattatactacttagattataatcatt 59
Query: 663 ttggggaagtttgactccactccttcttgctgccttttt 701
|||||||||||||||||||||||||||||||||||||||
Sbjct: 58 ttggggaagtttgactccactccttcttgctgccttttt 20
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1103
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1093
Effective search space: 755263
Effective search space used: 755263
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no530_d06.g1 MSMg01no530_d06.g1 CHROMAT_FILE:
MSMg01no530_d06.g1 PHD_FILE: MSMg01no530_d06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:26 2005
(646 letters)
>mm_chr10_20548790_20549835
Length = 1046
Score = 1181 bits (611), Expect = 0.0
Identities = 635/643 (98%)
Strand = Plus / Plus
Query: 4 aaaggtttctattagtcataggatgttagttctgacatagtggtgggcaaggaatgggta 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 aaaggtttctattagtcataggatattagttctgacatagtggtgggcaaggaatgggta 263
Query: 64 ccagagggggtggggtggggctaaagctagcccaagatagagataaggtaattagctatg 123
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 264 ccagagggggtgaggtggggctaaaactagcccaagatagagataaggtaattagctatg 323
Query: 124 gatctgcaacattccacaactagtgcagctctagtaaatcagtatttaaaaataaagcct 183
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 324 gatctgcaacattccacaactagtgtagctctagtaaatcagtatttaaaaataaagcct 383
Query: 184 ctttgtaggaattatcatttgctggagctatcctccagttttgcacacactagtatatgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctttgtaggaattatcatttgctggagctatcctccagttttgcacacactagtatatgt 443
Query: 244 atgtcctgtatagacagcaaaaaatgaatttttctaggccaaaattttaccaagtgattg 303
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atatcctgtatagacagcaaaaaatgaatttttctaggccaaaattttaccaagtgattg 503
Query: 304 attcaatgggaaaacaggtaagagtattacagtctatgcaagtaaaagtctaagataaat 363
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 504 attcaatgggaaaacaggtaagagtattagagtctatgcaagtaaaagtctaagataaat 563
Query: 364 cacaaagtgtaaggtgcatacagaccaggatactgcagggtcagttgaaatattagatgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cacaaagtgtaaggtgcatacagaccaggatactgcagggtcagttgaaatattagatgt 623
Query: 424 agttgtttaagaatgaagtattcgggggtaggattacgcatggaaagctctgggtaatgc 483
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 624 agttgtttaagaatgaagtattcgggggtaggattactcatggaaagctctgggtaatgc 683
Query: 484 tacaatcagtgaggacaccagagtgaagactgaagaggcatgtaagagagaagatcttca 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 684 tacaatcagtgaggacaccagagtgaagactgaagaggcatgtaagagagaagatcctca 743
Query: 544 gaggaccaaggtgagtgaatgacaggaaatgccaaggcacgggatggatttcccaggtgt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaggaccaaggtgagtgaatgacaggaaatgccaaggcacgggatggatttcccaggtgt 803
Query: 604 ttgttgaaagtcatccagtgtatctcatggagtcagggtgaca 646
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttgttgaaagtcatccagtgtatctcatggagtcagggtgaca 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
