Query= MSMg01no530_n15.b1 MSMg01no530_n15.b1 CHROMAT_FILE:
MSMg01no530_n15.b1 PHD_FILE: MSMg01no530_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:18 2005
(714 letters)
>mm_chr10_37570427_37571541
Length = 1115
Score = 1189 bits (615), Expect = 0.0
Identities = 632/639 (98%), Gaps = 4/639 (0%)
Strand = Plus / Minus
Query: 5 gaattcctttatctcttcactttaatttttgcttggtacttccaatcctgtttctttctg 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gaattcctttatctctttactttaatttttgcttggtacttccaatcctgtttctttctg 577
Query: 65 gttctatttgctttaaatatctttcctattttttaccattaaaccagtgtttctttgcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gttctatttgctttaaatatctttcctattttttaccattaaaccagtgtttctttgcta 517
Query: 125 gtgagatgtttttcttataaaaaatctattcttgggtcctaatttttcatcttacctgcc 184
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gtgaaatgtttttcttataaaaaatctattcttgggtcctaatttttcatcttacctgcc 457
Query: 185 aactcttgtctttcagttaaataacttagtccattaaaattctgtatttttgtcaaaggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aactcttgtctttcagttaaataacttagtccattaaaattctgtatttttgtcaaaggg 397
Query: 245 aatgcattgattcctctcattttataatcctc-ttttttttcatttgtaattctagtata 303
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 396 aatgcattgattcctctcattttataatcctctttttttttcatttgtaattctagtata 337
Query: 304 gtttctgttatctgtagtatcttggatatatttatcttttccctctctatatagaaattt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtttctgttatctgtagtatcttggatatatttatcttttccctctctatatagaaattt 277
Query: 364 tgcaagtatcttctcagtttgtatttgtcctggaaagcattttgtttctgttttagaact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgcaagtatcttctcagtttgtatttgtcctggaaagcattttgtttctgttttagaact 217
Query: 424 atatcatcgaatgcacttgtggttttaagagtttctgttgagaagttcacagctactcta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atatcatcgaatgcacttgtggttttaagagtttctgttgagaagttcacagctactcta 157
Query: 484 acaggtttgccatcatacaaagttgatgatttttttcaacattatttatatttctgtgtt 543
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 156 acaggtttgccatcatacaaagt---tgatttttttcaacattatttatatttctgtgtt 100
Query: 544 ctaggtattttatgtattataagatataaaggcacttctggtcatatatgttgtaaattc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ctaggtattttatgtattataagatataaaggcacttctggtcatatatgttgtaaattc 40
Query: 604 ttcctcctctggatatttttgcctagattgtaataactt 642
||||||| |||||||||||||||||||||||||||||||
Sbjct: 39 ttcctcccctggatatttttgcctagattgtaataactt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 714
Length of database: 1115
Length adjustment: 10
Effective length of query: 704
Effective length of database: 1105
Effective search space: 777920
Effective search space used: 777920
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no530_n15.g1 MSMg01no530_n15.g1 CHROMAT_FILE:
MSMg01no530_n15.g1 PHD_FILE: MSMg01no530_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:18 2005
(657 letters)
>mm_chr10_37407526_37408582
Length = 1057
Score = 1263 bits (653), Expect = 0.0
Identities = 656/657 (99%)
Strand = Plus / Plus
Query: 1 attataaggttaagcaggaggaagattgatcacacttccctctaagagtgaccagtaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attataaggttaagcaggaggaagattgatcacacttccctctaagagtgaccagtaatt 260
Query: 61 tatcacttataagtctgagttttctcctcagggttacccatagttctcacatcaactcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatcacttataagtctgagttttctcctcagggttacccatagttctcacatcaactcct 320
Query: 121 caagatcacatcttggaaaaggggaactggtttaatttgatcactgacagaatggagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagatcacatcttggaaaaggggaactggtttaatttgatcactgacagaatggagcca 380
Query: 181 agagaagaaaagtgactcacttaaggtcatgtcaaggtaacttcttcccgtcagcaaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagaagaaaagtgactcacttaaggtcatgtcaaggtaacttcttcccgtcagcaaggc 440
Query: 241 tcctgcatagccatgatggtcagcatacaaaatactgtctgatgagaatggaacttggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctgcatagccatgatggtcagcatacaaaatactgtctgatgagaatggaacttggct 500
Query: 301 tttagggatagagctgaaatctggaaaagttataaataaagtccttcaaaaacatcctgt 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 tttagggatagagctgaaatctggaaaagttataaatgaagtccttcaaaaacatcctgt 560
Query: 361 aataaaaaggaactgtaatgagttcagtggcaatgtgttaaactgaagtcttcataatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aataaaaaggaactgtaatgagttcagtggcaatgtgttaaactgaagtcttcataatct 620
Query: 421 aagtaattcctttcaaaccacacaaggaactctccacattaaatgaaaatccagcaaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagtaattcctttcaaaccacacaaggaactctccacattaaatgaaaatccagcaaagg 680
Query: 481 acttcctgatagaaaaagagcagagagtgagacactgggtttcttggatatctgccatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acttcctgatagaaaaagagcagagagtgagacactgggtttcttggatatctgccatgg 740
Query: 541 ggagccttggccttcataagtaggaaccaccaacagctctctttctttctttcctgaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggagccttggccttcataagtaggaaccaccaacagctctctttctttctttcctgaata 800
Query: 601 ctctatatgaaatcccccattctctgtcttcctgtgtagccttgctattatgacttg 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctctatatgaaatcccccattctctgtcttcctgtgtagccttgctattatgacttg 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
