Query= MSMg01no531_d15.b1 MSMg01no531_d15.b1 CHROMAT_FILE:
MSMg01no531_d15.b1 PHD_FILE: MSMg01no531_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:47 2005
(209 letters)
>mm_chr10_39361839_39362447
Length = 609
Score = 368 bits (190), Expect = e-106
Identities = 202/206 (98%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 5 gaattcttggacagtcacgg-ctacatagagaaaccctgtcttgaaaaacgaaccaacca 63
|||||||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gaattcttggacagcca-ggactacatagagaaaccctgtcttgaaaaacgaaccaacca 375
Query: 64 aaacaaaatccaaaactgttgaacacgctaagcaaccgctttatcctccagcacccccac 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 374 aaacaaaatccaaaactgttgaacacgctaagcaactgctttatcctccagcacccccac 315
Query: 124 tttactggtttttcactcctctctggaatctactgctgctgcgtgcctaggagaggcttc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tttactggtttttcactcctctctggaatctactgctgctgcgtgcctaggagaggcttc 255
Query: 184 tgggaagggagggagggagggaggga 209
||||||||||||||||||||||||||
Sbjct: 254 tgggaagggagggagggagggaggga 229
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 609
Length adjustment: 9
Effective length of query: 200
Effective length of database: 600
Effective search space: 120000
Effective search space used: 120000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no531_d15.g1 MSMg01no531_d15.g1 CHROMAT_FILE:
MSMg01no531_d15.g1 PHD_FILE: MSMg01no531_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:47 2005
(615 letters)
>mm_chr10_39177586_39178605
Length = 1020
Score = 1106 bits (572), Expect = 0.0
Identities = 607/622 (97%), Gaps = 9/622 (1%)
Strand = Plus / Plus
Query: 1 agacagacaaatccttctgaatgatgggccacaagagaagagaggttctcacagccaggc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacagacagatccttctgaatgatgggccacaagagaagagaggttctcacagccaggc 260
Query: 61 ------atctgcagagaagaggcagtctcctgctgcaggccccagcttcctcagctgagt 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcagcatctgcagagaagaggcagtctcctgctgcaggccccagcttcctcagctgagt 320
Query: 115 ttgtctttagttgaaatggtgtcgccatctgggctggtccttcattttgagtcaaggatg 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtctttagttgaaatggtgtcgccatctgggctggtccttcattttgagtcaaggatg 380
Query: 175 gatagtgattctggggg-tggaaggtgtgctgagagaggggacgggtctcggtacagttg 233
||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 gatagtgattctgggggatg-aaggtgtgctgagagaggggacaggtctcggtacagttg 439
Query: 234 attgagatcaagtattttgagacacggggctgtttatttgtacccacttgccatgacacc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attgagatcaagtattttgagacacggggctgtttatttgtacccacttgccatgacacc 499
Query: 294 acaatctggcttaagtgtggattgctaagcacttttgtagcccaatatggctgcatttgc 353
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 500 acagtctggcttaagtgtggattgctaagcacttctgtagcccaatatggctgcatttgc 559
Query: 354 tgaagctgggagattaaagcaacatatgtcaaactgtgatgcagaacaattctcttgaaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgaagctgggagattaaagcaacatatgtcaaactgtgatgcagaacaattctcttgaaa 619
Query: 414 agactttacttaattatggggcctattttgggagggtaactgtgctttttgtgtggtgta 473
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agactttacttaattatggg-cctattttgggagggtaactgtgctttttgtgtggtgta 678
Query: 474 ttttaggttacactcacccagcttccaggccagaaagggcgtggcatatgctgaggacat 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttttaggttacactcacccagcttccaggccagaaagggcgtggcatatgctgaggacat 738
Query: 534 aaatatgttcttacgaaagctctggtgtgatattctttcgcctttatgatccttgattcc 593
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 739 aaatatgttcttacgaaagctctgctgtgatgttctttcgcctttatgatccttgattcc 798
Query: 594 tttcttgtattttttgctctct 615
||||||||||||||||||||||
Sbjct: 799 tttcttgtattttttgctctct 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1020
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1010
Effective search space: 611050
Effective search space used: 611050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
