Query= MSMg01no531_l01.b1 MSMg01no531_l01.b1 CHROMAT_FILE:
MSMg01no531_l01.b1 PHD_FILE: MSMg01no531_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:24 2005
(657 letters)
>mm_chr10_126870086_126871142
Length = 1057
Score = 1234 bits (638), Expect = 0.0
Identities = 650/654 (99%)
Strand = Plus / Plus
Query: 4 ggaattctgtcctgtcactgagcaaggagaaaacatttggggactccagtgttgcttcca 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgtcctgaaactgagcaaggagaaaacatttggggactccagtgttgcttcca 263
Query: 64 tagagcactgccattgctgtcatctcccctgccccaaactgaactgttaggatgctagaa 123
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 264 tagagcactgccattgctgtcatcccccctgccccaaactgaactgttaggatgctagaa 323
Query: 124 tggcagtgtttcttatttatcagcagagtccatcactcagcatttgcagcagtgtttgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggcagtgtttcttatttatcagcagagtccatcactcagcatttgcagcagtgtttgtg 383
Query: 184 gaaactggttttatttaagaggggagggtaagctcattttttagctcttagtgatagaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaaactggttttatttaagaggggagggtaagctcattttttagctcttagtgatagaga 443
Query: 244 ctgttgccatggagtcctgaatcggattggctgacctaagggccaatgaaaagagagaac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgttgccatggagtcctgaatcggattggctgacctaagggccaatgaaaagagagaac 503
Query: 304 ataaaacgtaccatcatttaaccttgaagaatttctttattaggtgatttataacattaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ataaaacgtaccatcatttaaccttgaagaatttctttattaggtgatttataacattaa 563
Query: 364 tattgacaaaatgtagagtcatgaaataagatgtttcaaaaatgataaaaaggtgctttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tattgacaaaatgtagagtcatgaaataagatgtttcaaaaatgataaaaaggtgctttt 623
Query: 424 ctcaaactttgttgttaaatctgagtgttttacctgtatatcttcagtgtgatctgattg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctcaaactttgttgttaaatctgagtgttttacctgtatatcttcagtgtgatctgattg 683
Query: 484 ggagatgaaatccttacctcccatttgtaaattgcactcctgctacagccagaggcatgt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggagatgaaatccttacctcccatttgtaaattgcactcctgctacagccagaggcatgt 743
Query: 544 gacagggttatgaggtttggttttttgtgacagcgttggtttggtttgctttttcgagac 603
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 744 gacagggttatgaggtttggttttttgtgacagcattggtttggtttgctttttcgagac 803
Query: 604 agggtttctctgtgtaaaagctctgcctgtcttggaactcacagtgacccacct 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 agggtttctctgtgtaaaagctctgcctgtcttggaactcacagtgacccacct 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_l01.g1 MSMg01no531_l01.g1 CHROMAT_FILE:
MSMg01no531_l01.g1 PHD_FILE: MSMg01no531_l01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:24 2005
(608 letters)
>mm_chr10_127070316_127071324
Length = 1009
Score = 1021 bits (528), Expect = 0.0
Identities = 583/610 (95%), Gaps = 16/610 (2%)
Strand = Plus / Minus
Query: 1 aaggccagcctggtctacagagtgagttccaggacagccagggctacacagagaaaccct 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 970 aaggccagcctggtctacagagtgagttccaggacagccggggctacacagagaaaccct 911
Query: 61 gtctcaaaaaacaaaacaaaacaaacaaacaaggctcatgggttacatactggccagtgg 120
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 gtctcgaaaaacaaaactaaacaaacaaacaaggctcatgggttacatactggccagtgg 851
Query: 121 ggagaagggcagacttctatcacgagagtgtttttggacattattgcacgtgaatatttt 180
|||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 850 ggagaagggcagacttctatcatgagagtgtttttggacat-------------tatttt 804
Query: 181 catactgtcctttggacgagacaacgctgattgatgtcttagcttgatggaatgtacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 catactgtcctttggacgagacaacgctgattgatgtcttagcttgatggaatgtacatt 744
Query: 241 ttgagaaaacacagatgcaattttatgtcctttatgacctctac--acacacacctttca 298
||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 743 ttgagaaaacacagatgcaatcttatgtcctttatgacctctacatacacacacctttca 684
Query: 299 ctggggtcgcttcttttcaaattctctgaaggttcacattcctggacagtttcctgtaaa 358
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 683 ctggggtcgtttcttttcaaattctctgaaggttcacattcctggatagtttcctgtaaa 624
Query: 359 gtgttctgcttccagaaaaacccactatcctcatcgatgcattgattgagggaaccgagt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gtgttctgcttccagaaaaacccactatcctcatcgatgcattgattgagggaaccgagt 564
Query: 419 gcgtttcacagacaagacagctcaggagcactgggtagtggtctggaatttgtgggggtg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gcgtttcacagacaagacagctcaggagcactgggtagtggtctggaatttgtgggggtg 504
Query: 479 ttaaggggtgagatgaagccactggggggcccttgacatctctgaccctcatttccacat 538
|||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 503 ttaaggggtgagatgaagccactgggggccccttgacatctctgaccctcgtttccacac 444
Query: 539 gatcacatgtgatcatgacttagacagggcaaagttatccaggaatgttcccagtgtcct 598
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 443 gatcacatgtgatcatgacttaga-agggcaaagttatccaggaatgttcctagtgtcct 385
Query: 599 gcctgctcct 608
||||||||||
Sbjct: 384 gcctgctcct 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1009
Length adjustment: 10
Effective length of query: 598
Effective length of database: 999
Effective search space: 597402
Effective search space used: 597402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
