Query= MSMg01no531_l07.b1 MSMg01no531_l07.b1 CHROMAT_FILE:
MSMg01no531_l07.b1 PHD_FILE: MSMg01no531_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:25 2005
(561 letters)
>mm_chr10_28845349_28846310
Length = 962
Score = 1009 bits (522), Expect = 0.0
Identities = 549/558 (98%), Gaps = 3/558 (0%)
Strand = Plus / Minus
Query: 5 gaattcactaatactatacattccagcattagtatgaataagacagtcatctgcactgcc 64
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 694 gaattcactaatactatacatttcagcattagtatgaataagacagtcatctgcactgcc 635
Query: 65 cattctttgcagcagtctattcctatgcctcttcagttgccaattacaatgaaccaatgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cattctttgcagcagtctattcctatgcctcttcagttgccaattacaatgaaccaatgg 575
Query: 125 catgcatcatgcaccatgcacatgtctaataggacatatatttcctgacttatttacatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 catgcatcatgcaccatgcacatgtctaataggacatatatttcctgacttatttacatt 515
Query: 185 tttcttgtctatttacttccattttcaggctagcccttaaaattaattcattaagtttca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tttcttgtctatttacttccattttcaggctagcccttaaaattaattcattaagtttca 455
Query: 245 caaaatgtttttatgattatctgaattttacattgatgcaggaaaattagtctcttcata 304
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 454 caaaatgtttttatgattatctgaattttacattgatgcaggaaaattagtttcttcata 395
Query: 305 gtttattatttttcataagaacattactgattttgctcctt-aaaatattctttaataat 363
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 394 gtttattatttttcataagaacattactgattttgctccttaaaaatattctttaataat 335
Query: 364 gtttcaggtttgaattacgtatcatttagcttgaaatgagagattattacagtgttacat 423
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gtttcaggtttgaactacgtatcatttagcttgaaatgagagattattacagtgttacat 275
Query: 424 atttctttggctattggttcacttttttcttcaagtggacatagtctatattttaaactt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atttctttggctattggttcacttttttcttcaagtggacatagtctatattttaaactt 215
Query: 484 tattttctaatttttttggttctttgttttgttttgttttgggcttatttttgtttttgg 543
||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct: 214 tattttctaattttttttgttctttgttttgttttgttttggg-tt-tttttgtttttgt 157
Query: 544 ttttggtttttggttttt 561
||||| ||||||||||||
Sbjct: 156 ttttgttttttggttttt 139
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 962
Length adjustment: 10
Effective length of query: 551
Effective length of database: 952
Effective search space: 524552
Effective search space used: 524552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_l07.g1 MSMg01no531_l07.g1 CHROMAT_FILE:
MSMg01no531_l07.g1 PHD_FILE: MSMg01no531_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:25 2005
(613 letters)
>mm_chr10_28695615_28696627
Length = 1013
Score = 1170 bits (605), Expect = 0.0
Identities = 611/613 (99%), Gaps = 1/613 (0%)
Strand = Plus / Plus
Query: 1 ctgaagctttgaccaaatttagatggtggctctagcttttctgttctgtgaccataaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctgaagctttgaccaaatttagatggtggctctagcttttctgttctgtgaccataaatg 261
Query: 61 tcatagacatttattaaaaaaaaataaaaatcaaagatgaggttgaacccaaagaataag 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcatagacatttattaaaaaaaa-taaaaatcaaagatgaggttgaacccaaagaataag 320
Query: 121 atactgggagtatgtaccaaggccaaagatgttaaaacaggaagcataaaccaatggacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atactgggagtatgtaccaaggccaaagatgttaaaacaggaagcataaaccaatggacc 380
Query: 181 ccagagaaatacctttttcccaggaatttcatgctgagggaagacaggctgtaaataaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagagaaatacctttttcccaggaatttcatgctgagggaagacaggctgtaaataaag 440
Query: 241 ccctggcctgaccagaattattcacatagcaggaagagctttcttgcaattctaaaagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctggcctgaccagaattattcacatagcaggaagagctttcttgcaattctaaaagtg 500
Query: 301 tatctgtctctcagttgagctaacttatgtgtattttcttcattctacctacaaagctga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatctgtctctcagttgagctaacttatgtgtattttcttcattctacctacaaagctgt 560
Query: 361 aagacatctccaggaaaagagatgtcttacaaactaggagactttaatcccctgtttaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagacatctccaggaaaagagatgtcttacaaactaggagactttaatcccctgtttaga 620
Query: 421 aaaagtgaatgtaaatttgtattctctaccaattctttcttctagtttcttttcaaatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaagtgaatgtaaatttgtattctctaccaattctttcttctagtttcttttcaaatat 680
Query: 481 gagaaagttaaggcattaattttaagaaccaagcaaatttcaaccataaaaatgtaagcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagaaagttaaggcattaattttaagaaccaagcaaatttcaaccataaaaatgtaagcc 740
Query: 541 ccacttatcagtacaatgagcagcaatgaacaactctatccagtgcacactttttacaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccacttatcagtacaatgagcagcaatgaacaactctatccagtgcacactttttacaca 800
Query: 601 tagcatgaggatc 613
|||||||||||||
Sbjct: 801 tagcatgaggatc 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
