Query= MSMg01no531_p04.b1 MSMg01no531_p04.b1 CHROMAT_FILE:
MSMg01no531_p04.b1 PHD_FILE: MSMg01no531_p04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:44 2005
(705 letters)
>mm_chr10_124540677_124541781
Length = 1105
Score = 725 bits (375), Expect = 0.0
Identities = 413/427 (96%), Gaps = 4/427 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgcgattgcattaaggagtaagtgtataagagtaaaagccaatataaagtcac 63
||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||
Sbjct: 423 ggaattctgcgattgcattaaggagtaagtgtataagagtaaaaggcgatatgaagtcac 364
Query: 64 tggataataaagcaggccatagcttgattgccgggaggtcataagaactgatcatagtat 123
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 363 tggataataaagcaggccatagcttgattgcctggagatcataagaactgatcatagtat 304
Query: 124 ggctcaaagaattgagtgtgtcaggtggattgagctaacaatagaagataaaaagtaagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggctcaaagaattgagtgtgtcaggtggattgagctaacaatagaagataaaaagtaagg 244
Query: 184 gcagaggatttcttccctggacctttgtcaaaccactgattgttttacttactttttgat 243
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 243 gcagaggatttcttccctggacttttgtcaaaccactgattgttttacttactttttgat 184
Query: 244 tgctctgaccaaacactgtggccacaataacttgtaaaagaaagtgttgaatttggagtt 303
||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 183 tgctctgaccaaacactgtggccacaacaacttgtaaaagaaagcattgaatttggagtt 124
Query: 304 tagtggttctagaggatgagagtcctttaccatcctggtgggaagcatggcaaaaggcag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tagtggttctagaggatgagagtcctttaccatcctggtgggaagcatggcaaaaggcag 64
Query: 364 gaaggcaggcaggcagacagacagacaagcatgatactggaacagtaactgagagatggc 423
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct: 63 gaaggcaggcaggcaggc-g---gacaagcatgatactggaacagtaactgagagatggc 8
Query: 424 atttgat 430
|||||||
Sbjct: 7 atttgat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 705
Length of database: 1105
Length adjustment: 10
Effective length of query: 695
Effective length of database: 1095
Effective search space: 761025
Effective search space used: 761025
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no531_p04.g1 MSMg01no531_p04.g1 CHROMAT_FILE:
MSMg01no531_p04.g1 PHD_FILE: MSMg01no531_p04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:44 2005
(676 letters)
>mm_chr10_124415247_124416322
Length = 1076
Score = 1243 bits (643), Expect = 0.0
Identities = 667/675 (98%)
Strand = Plus / Plus
Query: 1 agaaatgtgagatgaataaatgttataatttcatcaagtagtccatccatgtaaattaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaatgtgagatgaataaatgttataatttcatcaagtagtccatccatgtaaattaat 260
Query: 61 agatacataaataaagctctcatcatgcaaatgcgtaatttaggaaagtaatatcataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatacataaataaagctctcatcatgcaaatgcgtaatttaggaaagtaatatcataag 320
Query: 121 aaagagcatttgcatttttctcagtttttatttagaagtttcaggttttcttctcaatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagagcatttgcatttttctcagtttttatttagaagtttcaggttttcttctcaatac 380
Query: 181 attactgagtaaagttcttaagttaataaaacatgcacagaattatacattatacagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attactgagtaaagttcttaagttaataaaacatgcacagaattatacattatacagcct 440
Query: 241 atcatatagtccaaaaccaattgacaaatataatcctattaacgtgtattattatataaa 300
||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||
Sbjct: 441 atcatatagtccaaaaccaatcgacaaacataatcctattaacgtgtactattatataaa 500
Query: 301 gccttaaatatctaaacattaggtaatgctattgagggaatatgctatctatagcaaata 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcattaaatatctaaacattaggtaatgctattgagggaatatgctatctatagcaaata 560
Query: 361 catctgatggtaagagaataggcataataacccaagtttaaaacaaacagcacataaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catctgatggtaagagaataggcataataacccaagtttaaaacaaacagcacataaaac 620
Query: 421 atgttagaggttgttagtctgtaacttagggagaaatgtgtaaattgttttgaaatattt 480
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 atgttagaggttgttagtctgtaacttagggagaaatgtgtacattgttttgaaatattt 680
Query: 481 atagtttttattgaacatttaggagaaaagtggaatgtagcagaaaatataagtagaaga 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atagtttttattgaacgtttaggagaaaagtggaatgtagcagaaaatataagtagaaga 740
Query: 541 atgtcttgagtaaacactgaattattgttgcattattaaaatcatacttgcatatttggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgtcttgagtaaacactgaattattgttgcattattaaaatcatacttgcatatttggt 800
Query: 601 gcttcaattactctatcaaatggcacacaatagcacacacacacatacacatacacacac 660
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 801 gcttcaattactctatcaaatggcacacaatagcacacacacacacacacacacacacac 860
Query: 661 acacacacacacacc 675
|||||||||||||||
Sbjct: 861 acacacacacacacc 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
