NNAACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCGTAGGGATTTTCTTCAGTCCAGTCTCTATCAGTGGCAGTGAC
AACCCCTCCTATTTGTCCCGTCGTTCAGGAGAGTGTGTGAAGCCCGCCTC
TCAAGGCTGCTTCAGAGCGCCCTGGAATGTTGCTCTTCCCAGGACTTTGA
GCTCCTTCCAACCCTAAAATCTGCTTACATCCATCCGGAGGGGCACTGAG
GTTTCCAGAAACACAAACCAACCCAGCAGGGACCCGTCCAAAGCAGAAGT
CTTTCAGACAGAGCCCACCCCAGGCCCCTCACTGTGAAAGAGAGAGAAAA
ACCCTGCAGTCACCCCTGGAAGCCAAAAGAGGATGTTGGCTCTTCCTTCA
GGAAACGTGGGGGAAAGGGGAGTTGGATGTCAAAGTAACAATGTAGCCAT
GTGATTGTTACACTGTAGTGATAGATGTGAGTTAACTTCAAAAGTGGCTT
TTTGATGTGGGCTGATCTTACTGGCTAAAAGCCTGGAGGTTCTGTGTTCT
GGCCCAAGTTCTTAGATTCCTGCGGCTTCTGTTCCTTTTAAGTCTTGACA
CCTCGAATGTGCAGGCTTCTCCATCTCTAAATTGTGGGCATTGAACTGAA
ACCTGGTCTCTCACAAAAACAATACAGCTTTCTTAGGGAACAAAACAATC
TCAGTTTTCTAAGGGCTGAGGGGGATGGGAATGGGGAGTCTGTGAAA

NNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATTAATTTGACTATTTCAG
GTACTTCATGTAAGAAAGATCATACGGCATTGGTTTTTCTATGGCTGGCT
TATTTCTCTTGGCATCTGTGTCCTAACCTTATCCAGGTTGTTGAGTGTTA
TGTAATATCTTTTCTTTTCACCGAAAGGACACATCACACTGTTCAAGTTC
ATTTGTCAGTGGGCATCCAGCTTGCTTCCATATCTCAGATATTGTGACTG
TGGGATTACAGATGTCCTTGAGATTCTGATATCTTTTTGGATAAATACTC
CAAAGCATAAGTGTTGAGTCTTTTCTAGTTAAATCTTTAGCTCTGTTTTT
AACTGTGTGAGAAAACTCTATATTGCTTTCATGAGCGATGGAGCCATCCT
GCATTCCCATCAGTAGCATACACACACACACACACACACACACACACACA
CACACACACACACACACACACACACACCTGTGAGAGGATATACACGCCAT
CCTGATAGATATGATGAGCTGATTCTATTTCCCCTAATGTTAGTGATCTT
TACAATTTCCCAGTGGTTATCTGTATGACTATTAGCCATTTTGCTTGTTT
TATTTGGTGAAGCTTCTGTTCAAGCTGTCTTTTCGTGCTTATTACTCAGT
AGGGTCAGGAGATGCTGAAAGTCACTTCTTTACAGGTCTTGGTGTGGT

Query= MSMg01no532_a12.b1 MSMg01no532_a12.b1 CHROMAT_FILE:
MSMg01no532_a12.b1 PHD_FILE: MSMg01no532_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:51 2005
         (556 letters)



>mm_chr10_88906582_88907537
          Length = 956

 Score = 1040 bits (538), Expect = 0.0
 Identities = 549/554 (99%), Gaps = 4/554 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcgtaggga--ttttcttcagtccagtctctatcagtggcagtgacaacccctcct 62
           |||||||||| ||  |||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcgtagcgaccttttc--cagtccagtctctatcagtggcagtgacaacccctcct 262

                                                                       
Query: 63  atttgtcccgtcgttcaggagagtgtgtgaagcccgcctctcaaggctgcttcagagcgc 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atttgtcccgtcgttcaggagagtgtgtgaagcccgcctctcaaggctgcttcagagcgc 322

                                                                       
Query: 123 cctggaatgttgctcttcccaggactttgagctccttccaaccctaaaatctgcttacat 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctggaatgttgctcttcccaggactttgagctccttccaaccctaaaatctgcttacat 382

                                                                       
Query: 183 ccatccggaggggcactgaggtttccagaaacacaaaccaacccagcagggacccgtcca 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ccatccggaggggcactgaggtttccagaaacacaaaccaacccagcagggacccgtcca 442

                                                                       
Query: 243 aagcagaagtctttcagacagagcccaccccaggcccctcactgtgaaagagagagaaaa 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aagcagaagtctttcagacagagcccaccccaggcccctcactgtgaaagagagagaaaa 502

                                                                       
Query: 303 accctgcagtcacccctggaagccaaaagaggatgttggctcttccttcaggaaacgtgg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 accctgcagtcacccctggaagccaaaagaggatgttggctcttccttcaggaaacgtgg 562

                                                                       
Query: 363 gggaaaggggagttggatgtcaaagtaacaatgtagccatgtgattgttacactgtagtg 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gggaaaggggagttggatgtcaaagtaacaatgtagccatgtgattgttacactgtagtg 622

                                                                       
Query: 423 atagatgtgagttaacttcaaaagtggctttttgatgtgggctgatcttactggctaaaa 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atagatgtgagttaacttcaaaagtggctttttgatgtgggctgatcttactggctaaaa 682

                                                                       
Query: 483 gcctggaggttctgtgttctggcccaagttcttagattcctgcggcttctgttcctttta 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gcctggaggttctgtgttctggcccaagttcttagattcctgcggcttctgttcctttta 742

                         
Query: 543 agtcttgacacctc 556
           ||||||||||||||
Sbjct: 743 agtcttgacacctc 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)