Query= MSMg01no532_d13.b1 MSMg01no532_d13.b1 CHROMAT_FILE:
MSMg01no532_d13.b1 PHD_FILE: MSMg01no532_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:05 2005
(690 letters)
>mm_chr10_106915840_106916929
Length = 1090
Score = 789 bits (408), Expect = 0.0
Identities = 414/416 (99%)
Strand = Plus / Minus
Query: 275 attgattctctggaagctaagaatgagcaggaaatcggactagattccaaagcacaaggc 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 attgattctctggaagctaagaatgagcaggaaatcggactagattccaaagcacaaggc 1031
Query: 335 ccgcctctggtagcacacttcctccaggaagcctcaccccttaaagagcccatgatcttc 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 ccgcctctggtagcacacttcctccaggaagcctcaccccttaaagagcccatgatcttc 971
Query: 395 ccaactagtggcaccaccttctgaaatactagtgttccaacatatgagattgtgggggcc 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 ccaactagtggcaccaccttctgaaatactagtgttccaacatatgagattgtgggggcc 911
Query: 455 tttgtacatccaaactataattctctcagtaaaacaggttataaagccaggcaagagtga 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 tttgtacatccaaactataattctctcagtaaaacaggttataaagccaggcaagagtga 851
Query: 515 gaaagaggaagttaacccacttcttttggtgatgggactagtcaggagtttttatctctg 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gaaagaggaagttaacccacttcttttggtgatgggactagtcaggagtttttatctctg 791
Query: 575 tgtaacttatcatagtgactggaattctccattccttactttggactcaattcatttcct 634
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 790 tgtaacttatcacagtgactggaattctccattccttactttgaactcaattcatttcct 731
Query: 635 gacttgtgtttctagcatgacccatgacacttagcagtcttgaactatgtcatggt 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gacttgtgtttctagcatgacccatgacacttagcagtcttgaactatgtcatggt 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_d13.g1 MSMg01no532_d13.g1 CHROMAT_FILE:
MSMg01no532_d13.g1 PHD_FILE: MSMg01no532_d13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:05 2005
(661 letters)
>mm_chr10_106758342_106759398
Length = 1057
Score = 1181 bits (611), Expect = 0.0
Identities = 648/661 (98%), Gaps = 4/661 (0%)
Strand = Plus / Plus
Query: 1 cattcagaggccgctgttcagacgggatctatagagcttgctgagtaacggcaggaggga 60
|||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 201 cattcagagggcgctgttcagatgggatctatagagcttgctgagtaagggcaggaggga 260
Query: 61 gtgggcgtgagacatgatgccacagtcaagcttaggagtcaggctgcttggggtcctatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgggcgtgagacatgatgccacagtcaagcttaggagtcaggctgcttggggtcctatt 320
Query: 121 aatggaaatacagaatgtaggaagagaagagctagttttcaagaaaaaaaaataatgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 aatggaaatacagaatgtaggaagagaagagctagttttcaagaaaaaaaa-taatgagc 379
Query: 181 tcggttttaaacatactgagttctttgtacccatggggtatctgggtagagtattttatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcggttttaaacatactgagttctttgtacccatggggtatctgggtagagtattttatg 439
Query: 241 cgctggaaaggcataacatctcagctggtgcatcagtaattgtaggatgtgcctggtatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cgctggaaaggcataacatctcagctggtgcatcagtaattgtaggatgtgcctggtatt 499
Query: 301 gtcgaattgactgtgtcgtcttccagtttatgtactagaagtcagacttcagaaactgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtcgaattgactgtgtcgtcttccagtttatgtactagaagtcagacttcagaaactgac 559
Query: 361 ggggtagcattgatttcatgatttgttttactttgggctacaattggcaataaaaataac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggggtagcattgatttcatgatttgttttactttgggctacaattggcaataaaaataac 619
Query: 421 ggccccggggggggagattctaaagtccctccctggtaatttgcttcagttagatacaca 480
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgccccggggggg-agattctaaagtccctccctggtaatttgcttcagttagatacaca 678
Query: 481 tacccatgctaagcttgcccaaattcagaagtgtaacaattttttcccccataggcaact 540
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 679 tacccatgctaagcttgcccaaattcagaagtgtaacaattttt--ccccataggcaact 736
Query: 541 gtgctgttatatcttttctcattagattgggaattccatgatttcagaaaaaaatattat 600
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gtgctgttatatcttttatcagtagattgggaattccatgatttcagaaaaaaatattat 796
Query: 601 ttctgataagcttcgtactacatataacagaatctgaaattgatagatgtatgtatggat 660
||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 797 ttctgataagctttgtactacatataacagaacctgaaattgatagatgtatgcatggat 856
Query: 661 g 661
|
Sbjct: 857 g 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1057
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1047
Effective search space: 681597
Effective search space used: 681597
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
