Query= MSMg01no532_e21.b1 MSMg01no532_e21.b1 CHROMAT_FILE:
MSMg01no532_e21.b1 PHD_FILE: MSMg01no532_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:11 2005
(343 letters)
>mm_chr10_100690469_100691211
Length = 743
Score = 632 bits (327), Expect = 0.0
Identities = 336/339 (99%), Gaps = 2/339 (0%)
Strand = Plus / Plus
Query: 6 aattacacagaagtattctggaattttcagcagagtgctttcttaacagaatgaaaatat 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattacacagaagtattttggaattttcagcagagtgctttcttaacagaatgaaaatat 265
Query: 66 atctatatcctctgtctcccaccccattgcttatagcttatccatagaagtacctgaaca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atctatatcctctgtctcccaccccattgcttatagcttatccatagaagtacctgaaca 325
Query: 126 ggaaaaagaaaaccaacagaaataatgaaaaatagcaagctgctattgactttgtattca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggaaaaagaaaaccaacagaaataatgaaaaatagcaagctgctattgactttgtattca 385
Query: 186 gctccaaataacacaaagaatttctaaactggaaatgtctttttcacagagaaagccagc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gctccaaataacacaaagaatttctaaactggaaatgtctttttcacagagaaagccagc 445
Query: 246 ctccaaacctgatattctcctggtaaagacctcagtttttttttt-ccttgaacagattc 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 446 ctccaaacctgatattctcctggtaaagacctcagtttttttttttccttgaacagattc 505
Query: 305 tgaagccttgattaaacaatcaatggtgtggggtgtgtg 343
||||||||||||||||||||||||| |||||||||||||
Sbjct: 506 tgaagccttgattaaacaatcaatg-tgtggggtgtgtg 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_e21.g1 MSMg01no532_e21.g1 CHROMAT_FILE:
MSMg01no532_e21.g1 PHD_FILE: MSMg01no532_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:12 2005
(662 letters)
>mm_chr10_100751689_100752750
Length = 1062
Score = 1118 bits (578), Expect = 0.0
Identities = 596/602 (99%), Gaps = 1/602 (0%)
Strand = Plus / Minus
Query: 1 cattgccagaggaaaggctaagcattttgattttcacttctgggactggatgaaccatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cattgccagaggaaaggctaagcattttgattttcacttctgggactggatgaaccatga 543
Query: 61 agtaggaaaattgttcttcactacacatgagtggaattggaagtaggaaggcagggaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agtaggaaaattgttcttcactacacatgagtggaattggaagtaggaaggcagggaaaa 483
Query: 121 aataagcagatagaaaaagatacagaaagggtaaccatctgtatcagtgacctgccattg 180
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 482 aagaagcagatagaaaaagatacagaaagtgtaaccatctgtatcagtgacctgccattg 423
Query: 181 cttgcttggagaaagagatgagaaaattttagttggatccacaacatcgattttgaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cttgcttggagaaagagatgagaaaattttagttggatccacaacatcgattttgaagct 363
Query: 241 gtttgcttacaaagaaaatatattccgttttgttaattttatggaagttttccatggctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gtttgcttacaaagaaaatatattccgttttgttaattttatggaagttttccatggctc 303
Query: 301 cctgtctctaaagacaaacaaaaataaggacggatctttctaaatctattattttactta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cctgtctctaaagacaaacaaaaataaggacggatctttctaaatctattattttactta 243
Query: 361 tttgttaatctcaagccaaaattccttttacaatgacttcttccactcccc-gccccaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 242 tttgttaatctcaagccaaaattccttttacaatgacttcttccactcccccgccccaac 183
Query: 420 cccatgccaggcctccctacttcctagggcctcaagtctctggagggttaggcgcatctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 182 cccatgccaggcctccctacttcctagggcctcaagtctctggagggttaggcacatctt 123
Query: 480 ctcttactgagaccaaagcaggcagtcctctgctttttatgtgtcagtggcctcatatca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctcttactgagaccaaagcaggcagtcctctgctttttatgtgtcagtggcctcatatca 63
Query: 540 gctagtgtatgctgtctggttggtggttcactctctgagagatctcggggatccaagtta 599
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 62 gctagtgtatgctgtctggttggtggttcactctctgagagatctcggggttccaggtta 3
Query: 600 gt 601
||
Sbjct: 2 gt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
