Query= MSMg01no532_h04.b1 MSMg01no532_h04.b1 CHROMAT_FILE:
MSMg01no532_h04.b1 PHD_FILE: MSMg01no532_h04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:22 2005
(425 letters)
>mm_chr10_51199013_51199839
Length = 827
Score = 578 bits (299), Expect = e-169
Identities = 392/425 (92%), Gaps = 10/425 (2%)
Strand = Plus / Plus
Query: 5 gaattcaacactt-attcgctatataggtgttactgtacataacatgtgccacgttgaac 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattcaacacttaatt-gctatataggtgttactgtacataacatgtgccacattgaac 263
Query: 64 aatacatctctgaagagagttcttcctgaggagtgaaactttatcatctcggtgcaattc 123
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 264 aatacatctctgaagagagttcttcctgaggagtgaaactttatcgtctcagtgcaattc 323
Query: 124 cttcctcagctcacagccttcgcatctgtcatctttttcctttttctaagtgtttggcat 183
|||| |||| |||||||| || |||||||||| ||||||||| |||||||||||||||||
Sbjct: 324 cttcatcagatcacagccctcacatctgtcatatttttccttcttctaagtgtttggcat 383
Query: 184 ctttagggtccacacaaaagattttctctgcagaagtc-ttattctccatcaactcttca 242
|||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||
Sbjct: 384 ctttagggtccacacaaaagattttctctgcagaagtcctttttttccatcaacttttca 443
Query: 243 aataattatccagaagtcatgttttaggaataaagatattttattatt-acgatttttt- 300
|||| |||||| |||| ||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 444 aatacttatccggaagacatgttttaggaataaagatattttattattga-gattttttt 502
Query: 301 --gtttcatttatttcaggcattaccatctttatgtcagaacaacagactcagttttaat 358
|||||| |||||||||||||||||||||||||| || ||| |||||||||||||||||
Sbjct: 503 ttgtttcacttatttcaggcattaccatctttatgccaaaacgacagactcagttttaat 562
Query: 359 gtgtgttttatgttttcattgtcttttatcataattctaattattttacatattctatta 418
|||| |||| |||||||||||||| |||||||||||||| |||||||||||| ||||||
Sbjct: 563 gtgt--tttaggttttcattgtcttctatcataattctaaatattttacatatactatta 620
Query: 419 ttttg 423
|||||
Sbjct: 621 ttttg 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 827
Length adjustment: 9
Effective length of query: 416
Effective length of database: 818
Effective search space: 340288
Effective search space used: 340288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_h04.g1 MSMg01no532_h04.g1 CHROMAT_FILE:
MSMg01no532_h04.g1 PHD_FILE: MSMg01no532_h04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:22 2005
(619 letters)
>mm_chr10_51350922_51351940
Length = 1019
Score = 1181 bits (611), Expect = 0.0
Identities = 617/619 (99%)
Strand = Plus / Minus
Query: 1 tttcctaaatagctgatcaactactgtaattctttggcattgaatgcagcatgtttgaaa 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 819 tttcctaaatagctgatcaactactgtaattctttggcattgaaagcagcatgtttgaaa 760
Query: 61 atatagagctgtcccttttttaagcagaaggatttttcccagtctgcttctttcagaaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 759 atatagagctgtcccttttttaagcagaaggatttttcccagtctgcttctttcagaaaa 700
Query: 121 atctacaacgagcttcaaaagaaaagccaacaggaagcaaatcccttaactttgctctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 atctacaacgagcttcaaaagaaaagccaacaggaagcaaatcccttaactttgctctgg 640
Query: 181 agtcaaagaatacaatgtcccaaagatctgtgtttacaattctgtcagcatgcctctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 agtcaaagaatacaatgtcccaaagatctgtgtttacaattctgtcagcatgcctctgtg 580
Query: 241 tttacattccatcagttcatctccagctctcagatgcccactgtcacatgctccgcagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tttacattccatcagttcatctccagctctcagatgcccactgtcacatgctccgcagca 520
Query: 301 gagactcttggaatcggacatgttcttattggtgaaagaactgttttcactatcatcaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gagactcttggaatcggacatgttcttattggtgaaagaactgttttcactatcatcaag 460
Query: 361 aatctgaatattgaacacttctggctcttgacattgtcccatgcttccaaagtgtttagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aatctgaatattgaacacttctggctcttgacattgtcccatgcttccaaagtgtttagg 400
Query: 421 gaaaattaggaatcttatctttagcatctgtgagctgaatggctcttaataaccctcatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gaaaattaggaatcttatctttagcatctgtgagctgaatggctcttaataaccctcatg 340
Query: 481 aactgagcaaatgagacagaaagatggccctattgattacagtagttacttgcttcatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aactgagcaaatgagacagaaagatggccctattgattacagtagttacttgcttcatga 280
Query: 541 ttattcttgatacctcccagtcttgtcataccccagatgacttcgtggctatcacttctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ttattcttgatacctcccagtcttgtcataccccagatgacttcgtggctatcacttctc 220
Query: 601 ctggacatatcatgattgg 619
|||||||||||||||||||
Sbjct: 219 ctggacatatcatgattgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
