Query= MSMg01no532_h09.b1 MSMg01no532_h09.b1 CHROMAT_FILE:
MSMg01no532_h09.b1 PHD_FILE: MSMg01no532_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:23 2005
(621 letters)
>mm_chr10_70631324_70632347
Length = 1024
Score = 1120 bits (579), Expect = 0.0
Identities = 609/621 (98%), Gaps = 5/621 (0%)
Strand = Plus / Plus
Query: 5 gaattctctgccttccgagagatcagacccatcgaaagacacaggagtgtcatctgacac 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgccagctgagagatcagacccatcgaaagacacaggagtgtcatctgacac 264
Query: 65 aaaataaacatagactcatggggtcaggctgcgaagatggctgtgacaccccagtttgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaataaacatagactcatggggtcaggctgcgaagatggctgtgacaccccagtttgat 324
Query: 125 cccctgaacacaagtgaagatggaaagagggagaaaactctacaaatgtgtcccctgacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccctgaacacaagtgaagatggaaagagggagaaaactctacaaatgtgtcccctgacc 384
Query: 185 tttacataaggtcacagtcacatagccagaagcctcaggctgcagagggaggttttatca 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 tttacataaggtcacagtcacatagccagaagcctcaggctgcagaggg-ggttttatca 443
Query: 245 ctttctaatgggaagaggaggtgttgagtacattccagttgtgggtgaagcccttctagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctttctaatgggaagaggaggtgttgagtacattccagttgtgggtgaagcccttctagg 503
Query: 305 tgtagagagactggttagagttctcttgctatttccataagatgaatttggaacaccatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtagagagactggttagagttctcttgctatttccataagatgaatttggaacaccatc 563
Query: 365 aacaaaaaagtctcgaatgtaaaaacttaccattggtattttcaacacctcaatgcaaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aacaaaaaagtctcgaatgtaaaaacttaccattggtattttcaacacctcaatgcaaac 623
Query: 425 aaacaaacaaa----agaccaggaccatcaaaaagagatcaggctggatggatgtggaca 480
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 624 aaacaaacaaacaaaagaccaggaccatcaaaaagagaccaggctggatggatgtggaca 683
Query: 481 ggtaagggcagacagacagacaaggatcctgacgatagacataagctttcacagttatcc 540
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 684 ggtaaggacagacagacagacaaggatcctgacgatagacataagctctcacagttatcc 743
Query: 541 gaatctcagacaatggtagcaccctgctgagaccaccacccaaggaggtgatccgcccag 600
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 744 gaatctcagacaatggtagcaccctgctgagaccactacccaaggaggtgatccgcccag 803
Query: 601 actcacagcttctccagttgt 621
|||||||||||||||||||||
Sbjct: 804 actcacagcttctccagttgt 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1024
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1014
Effective search space: 619554
Effective search space used: 619554
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_h09.g1 MSMg01no532_h09.g1 CHROMAT_FILE:
MSMg01no532_h09.g1 PHD_FILE: MSMg01no532_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:23 2005
(573 letters)
>mm_chr10_70773355_70774327
Length = 973
Score = 1073 bits (555), Expect = 0.0
Identities = 567/573 (98%), Gaps = 4/573 (0%)
Strand = Plus / Minus
Query: 1 tttcattctggttgtccacaggtgaaatctcagccccggagacttgagactgaagatgga 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 838 tttcattctggttgtccacaggtgaaatctcagccccggagagttgagactgaagatgga 779
Query: 61 atttgaggctatcctgctctatatattgagttctgagctagtttagactacactgtgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 atttgaggctatcctgctctatatattgagttctgagctagtttagactacactgtgaga 719
Query: 121 ccctgtcttgaagaaataagccaaatacaactcattataaagccaaagctattgaaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ccctgtcttgaagaaataagccaaatacaactcattataaagccaaagctattgaaatag 659
Query: 181 catgattcaatgtggtataataataccagaagcactgtaaagatttacagggcttaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 catgattcaatgtggtataataataccagaagcactgtaaagatttacagggcttaaaca 599
Query: 241 gtgacaagacacactgtcccacaaggaatatgacaaactagctttatggaatagtccaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gtgacaagacacactgtcccacaaggaatatgacaaactagctttatggaatagtccaca 539
Query: 301 tacattcccagttaaaattcaagaataaaatgcaaaccctaaagggcttaggaaagctag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tacattcccagttaaaattcaagaataaaatgcaaaccctaaagggcttaggaaagctag 479
Query: 361 gtttagtgacatatacctataattacactgtaacccagcattcaggggttgaaggcaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gtttagtgacatatacctataattacactgtaacccagcattcaggggttgaaggcaggg 419
Query: 421 acagccagtttctaggccaacctgagactcaaacaaaaacaagattttagaggaaaaaac 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 acagccagtttctaggcgaacctgagactcaaacaaaaacaagattttagaggaaaaaac 359
Query: 481 aaaagcaaaatacaaaacaaaacaaaaaacaaacaaacaaacaaacaaaaaactgaagcg 540
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 358 aaaagcaaaatacaaaacaaaacaaa----aaacaaacaaacaaacaaaaaactgaagcg 303
Query: 541 agcaagcaagcaaacaaacaaaaaaaatacaat 573
|||||||||||||||||||||||||||||||||
Sbjct: 302 agcaagcaagcaaacaaacaaaaaaaatacaat 270
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
