Query= MSMg01no532_h18.b1 MSMg01no532_h18.b1 CHROMAT_FILE:
MSMg01no532_h18.b1 PHD_FILE: MSMg01no532_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:25 2005
(679 letters)
>mm_chr10_101290055_101291133
Length = 1079
Score = 1236 bits (639), Expect = 0.0
Identities = 666/675 (98%)
Strand = Plus / Minus
Query: 5 gaattctgcattgctgtaatagcctctgtaataacgatgtcaggactaactagctcgcca 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 879 gaattctgcattgctgtaatagcctctgtaataaccatgtcaggactaactagctcgcca 820
Query: 65 ttgatgtgattaaaatatacgtagcctatattagaaaaggtacactgtacagagcttgat 124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 819 ttgatgtgattaaaatatacgtagcctatatcagaaaaggtacactgtacagagcttgat 760
Query: 125 ttaaaggaggcctgtcttttatgataattgctttacagactatgacagttttaatcttgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ttaaaggaggcctgtcttttatgataattgctttacagactatgacagttttaatcttgg 700
Query: 185 tgaatatgagatttttcccatctgcatagtacagttaccctgaaagctttaaatacattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tgaatatgagatttttcccatctgcatagtacagttaccctgaaagctttaaatacattg 640
Query: 245 tactctgacagctcaatgggttaggttttcttttaattataaataatgtattaagacaat 304
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 639 tactctgacagctcaatgggttaggttttcttttaattataaataatggattaagacaat 580
Query: 305 gccatatcaattcattcactcacccgttatatacttttatacatattgagtactatgtta 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 579 gccatatcaattcattcactcacccattatatacttttatacatattgagtactatgtta 520
Query: 365 ctggcttgcagttaaaagatgaataaaatgtgatgaatgttctacagagatgtctctatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ctggcttgcagttaaaagatgaataaaatgtgatgaatgttctacagagatgtctctatc 460
Query: 425 ctggcaagctaagcacagaattatattattatagtggttttccatctatacaacagcttc 484
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 459 ctggcaagctaagcacagaattatattattatagtgattttccacctatacaacagcttc 400
Query: 485 agagaatacagttatattctgtttccaggtttagttatgattgaatatattgaaattgtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 399 agagaatacagttatattctgtttccaggtttagttatgattgaatatatttaaattgtg 340
Query: 545 aaattcaattctaatgagtcaaaggaggtcaatcatgaagactgatgcttactttggcag 604
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aaattcaattctaatgagtcaaaggaggtcaatcatgaagactgatgcttactttggcat 280
Query: 605 aaggcaaaaatcaagtttctgagctttcagatattctcaattctagaattttagaaagat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 279 aaggcaaaaatcaagtttctgagctttcagatattctcaattctagaattttataaagat 220
Query: 665 acatgacttgaaatt 679
|||||||||||||||
Sbjct: 219 acatgacttgaaatt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_h18.g1 MSMg01no532_h18.g1 CHROMAT_FILE:
MSMg01no532_h18.g1 PHD_FILE: MSMg01no532_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:25 2005
(346 letters)
>mm_chr10_101147667_101148412
Length = 746
Score = 514 bits (266), Expect = e-150
Identities = 311/344 (90%), Gaps = 29/344 (8%)
Strand = Plus / Plus
Query: 1 ccctcattctacacttctgggtttttccccaccttcactcccatctggatagagcacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ccctcattctacacttctgggtttttccccaccttcactcccatctggatagagcacttt 285
Query: 61 tctgtctctcattagaaaacaggcttctagccgggcgtggtggctcacgcctttaatccc 120
||||| |||||||||||||||||||| |||||||
Sbjct: 286 tctgtttctcattagaaaacaggctt---------------------------taatccc 318
Query: 121 agcacttgggaggcagaggcaggtggatttctgagtttgagccagcctggtctacaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agcacttgggaggcagaggcaggtggatttctgagtttgagccagcctggtctacaaagt 378
Query: 181 gagttccaggacaaccagggctacagagaaactctgtctcaaaaaaccaaatatatatat 240
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 379 gagttccaggacaaccagggctacagagaaaccctgtctcaaaaaaccaaatatatataa 438
Query: 241 aa--aaacgggcttctaactgttaataaaaaataattatacaatacgataaaacaaaact 298
|| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aagaaaacgggcttgtaactgttaataaaaaataattatacaatacgataaaacaaaact 498
Query: 299 aacacatcagaagtcagagaccctcttaaacacacacacacaca 342
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aacacatcagaagtcagagaccctcttaaacacacacacacaca 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
